RNA–Protein interactions for RNA: ENST00000446636.5

CTTNBP2-208, Transcript of cortactin binding protein 2, humanhuman

TSL 5

Gene CTTNBP2, Length 4,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-208ENST00000446636 VPS53Q5VIR6 699 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 SASS6Q6UVJ0 657 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 MPHOSPH8Q99549 860 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 CCDC171Q6TFL3 1326 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 VPS37DQ86XT2 251 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 RNF214Q8ND24 703 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 SLAIN2Q9P270 581 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 MON2Q7Z3U7 1717 aa11.71□□□□□ -0.54
CTTNBP2-208ENST00000446636 IMMTQ16891 758 aaKnown RBP11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 DDX17Q92841 729 aaKnown RBP11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 ATP10DQ9P241 1426 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 NFXL1Q6ZNB6 911 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 CCDC191Q8NCU4 936 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 ERICH2A1L162 156 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 PIP4K2AP48426 406 aaPredicted RBP11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
CTTNBP2-208ENST00000446636 GOLIM4O00461 696 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 BECN2A8MW95 431 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 ZFYP08048 801 aaPredicted RBP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 GJB2P29033 226 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 AK2P54819 239 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 AKAP17AQ02040 695 aaKnown RBP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 MTX1Q13505 466 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 SYCE3A1L190 88 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 TFCP2Q12800 502 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 PROSER3Q2NL68 480 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 CREB3L3Q68CJ9 461 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 SNX14Q9Y5W7 946 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 CEMIPQ8WUJ3 1361 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
CTTNBP2-208ENST00000446636 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 ESPNB1AK53 854 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 C3P01024 1663 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 TPM3P06753 285 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 LDHAL6AQ6ZMR3 332 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 NACAP1Q9BZK3 213 aa11.68□□□□□ -0.54
CTTNBP2-208ENST00000446636 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 ZNF652Q9Y2D9 606 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 UBE2HP62256 183 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 SAFBQ15424 915 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 RIMS1Q86UR5 1692 aaKnown RBP11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
CTTNBP2-208ENST00000446636 ATP5JP18859 108 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 WDR17Q8IZU2 1322 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 EYA2O00167 538 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 FOSBP53539 338 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 CARD10Q9BWT7 1032 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 CDKL5O76039 1030 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 GPTP24298 496 aa11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 EAF2Q96CJ1 260 aaPredicted RBP11.66□□□□□ -0.54
CTTNBP2-208ENST00000446636 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 LRSAM1Q6UWE0 723 aa11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 AKAP12Q02952 1782 aa11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 F13A1P00488 732 aa11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 TNMDQ9H2S6 317 aa11.65□□□□□ -0.54
CTTNBP2-208ENST00000446636 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.55
CTTNBP2-208ENST00000446636 SLC5A1P13866 664 aa11.65□□□□□ -0.55
CTTNBP2-208ENST00000446636 FERMT3Q86UX7 667 aa11.65□□□□□ -0.55
CTTNBP2-208ENST00000446636 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.55
CTTNBP2-208ENST00000446636 NUTM2BA6NNL0 878 aaPredicted RBP11.64□□□□□ -0.55
CTTNBP2-208ENST00000446636 NUTM2EB1AL46 878 aaPredicted RBP11.64□□□□□ -0.55
CTTNBP2-208ENST00000446636 A1BGP04217 495 aa11.64□□□□□ -0.55
CTTNBP2-208ENST00000446636 NUTM2AQ8IVF1 878 aaPredicted RBP11.64□□□□□ -0.55
CTTNBP2-208ENST00000446636 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms