RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 POLR3GLQ9BT43 218 aa7.92□□□□□ -1.14
LINC01880-201ENST00000446593 DDX21Q9NR30 783 aaKnown RBP eCLIP7.92□□□□□ -1.14
LINC01880-201ENST00000446593 TBC1D2BQ9UPU7 963 aa7.92□□□□□ -1.14
LINC01880-201ENST00000446593 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
LINC01880-201ENST00000446593 CA12O43570 354 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 NPR1P16066 1061 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 ZEB1P37275 1124 aaPredicted RBP7.91□□□□□ -1.14
LINC01880-201ENST00000446593 FKBP4Q02790 459 aaKnown RBP eCLIP7.91□□□□□ -1.14
LINC01880-201ENST00000446593 GRM1Q13255 1194 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 GPC2Q8N158 579 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 JDP2Q8WYK2 163 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 CAPNS2Q96L46 248 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 TMEM106CQ9BVX2 250 aa7.91□□□□□ -1.14
LINC01880-201ENST00000446593 COL5A3P25940 1745 aaPredicted RBP7.9□□□□□ -1.14
LINC01880-201ENST00000446593 RNF123Q5XPI4 1314 aa7.9□□□□□ -1.14
LINC01880-201ENST00000446593 FZD9O00144 591 aa7.9□□□□□ -1.14
LINC01880-201ENST00000446593 LMOD1P29536 600 aaPredicted RBP7.9□□□□□ -1.14
LINC01880-201ENST00000446593 ALDH1B1P30837 517 aa7.9□□□□□ -1.14
LINC01880-201ENST00000446593 IL13P35225 146 aa7.9□□□□□ -1.14
LINC01880-201ENST00000446593 MAP2K2P36507 400 aa7.9□□□□□ -1.14
LINC01880-201ENST00000446593 IL6STP40189 918 aaPredicted RBP7.9□□□□□ -1.14
LINC01880-201ENST00000446593 NBPF5PQ86XG9 351 aaPredicted RBP7.9□□□□□ -1.14
LINC01880-201ENST00000446593 C7orf43Q8WVR3 580 aa7.9□□□□□ -1.14
LINC01880-201ENST00000446593 ZNF277Q9NRM2 450 aaPredicted RBP7.9□□□□□ -1.14
LINC01880-201ENST00000446593 SBF1O95248 1867 aa7.89□□□□□ -1.15
LINC01880-201ENST00000446593 EIF6P56537 245 aaKnown RBP7.89□□□□□ -1.15
LINC01880-201ENST00000446593 CYP4F22Q6NT55 531 aa7.89□□□□□ -1.15
LINC01880-201ENST00000446593 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
LINC01880-201ENST00000446593 TPTE2Q6XPS3 522 aa7.89□□□□□ -1.15
LINC01880-201ENST00000446593 MYH14Q7Z406 1995 aaKnown RBP7.88□□□□□ -1.15
LINC01880-201ENST00000446593 ZNF541Q9H0D2 1346 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 IARSP41252 1262 aaKnown RBP7.88□□□□□ -1.15
LINC01880-201ENST00000446593 TEFQ10587 303 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 ZNF790Q6PG37 636 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 DZIP3Q86Y13 1208 aaKnown RBP7.88□□□□□ -1.15
LINC01880-201ENST00000446593 RASEFQ8IZ41 740 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 SYNE4Q8N205 404 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 ZNF496Q96IT1 587 aaPredicted RBP7.88□□□□□ -1.15
LINC01880-201ENST00000446593 MCOLN1Q9GZU1 580 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 PANK3Q9H999 370 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 ZNF652Q9Y2D9 606 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 GJA3Q9Y6H8 435 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 TLL2Q9Y6L7 1015 aa7.88□□□□□ -1.15
LINC01880-201ENST00000446593 KIF20BQ96Q89 1820 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 KLRG2A4D1S0 409 aaPredicted RBP7.87□□□□□ -1.15
LINC01880-201ENST00000446593 CAMTA2O94983 1202 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 HMOX1P09601 288 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 GTF2E1P29083 439 aaPredicted RBP7.87□□□□□ -1.15
LINC01880-201ENST00000446593 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
LINC01880-201ENST00000446593 GRIPAP1Q4V328 841 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 USP50Q70EL3 339 aaPredicted RBP7.87□□□□□ -1.15
LINC01880-201ENST00000446593 FMNL2Q96PY5 1086 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 PSMD1Q99460 953 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 TSKSQ9UJT2 592 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 KNSTRNQ9Y448 316 aa7.87□□□□□ -1.15
LINC01880-201ENST00000446593 A1BGP04217 495 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 BRPF1P55201 1214 aaPredicted RBP7.86□□□□□ -1.15
LINC01880-201ENST00000446593 DGKZQ13574 1117 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 CST9Q5W186 159 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 HHIPL1Q96JK4 782 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 TIAM2Q8IVF5 1701 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 NRXN2Q9P2S2 1712 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 ANKRD26Q9UPS8 1709 aa7.86□□□□□ -1.15
LINC01880-201ENST00000446593 HEG1Q9ULI3 1381 aa7.85□□□□□ -1.15
LINC01880-201ENST00000446593 AOC2O75106 756 aa7.85□□□□□ -1.15
LINC01880-201ENST00000446593 EPS15P42566 896 aa7.85□□□□□ -1.15
LINC01880-201ENST00000446593 SAPCD2Q86UD0 394 aa7.85□□□□□ -1.15
LINC01880-201ENST00000446593 TMX4Q9H1E5 349 aaPredicted RBP7.85□□□□□ -1.15
LINC01880-201ENST00000446593 ADAMTS7Q9UKP4 1686 aa7.85□□□□□ -1.15
LINC01880-201ENST00000446593 TJP1Q07157 1748 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 GNAT3A8MTJ3 354 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 TRAF5O00463 557 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 RGL2O15211 777 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 DIAPH1O60610 1272 aaKnown RBP7.84□□□□□ -1.15
LINC01880-201ENST00000446593 CELF2O95319 508 aaKnown RBP7.84□□□□□ -1.15
LINC01880-201ENST00000446593 FMR1Q06787 632 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC01880-201ENST00000446593 OLFM4Q6UX06 510 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 IFNL1Q8IU54 200 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 LARGE2Q8N3Y3 721 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 TIMELESSQ9UNS1 1208 aa7.84□□□□□ -1.15
LINC01880-201ENST00000446593 NIP7Q9Y221 180 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC01880-201ENST00000446593 FAM177BA6PVY3 158 aa7.83□□□□□ -1.16
LINC01880-201ENST00000446593 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
LINC01880-201ENST00000446593 SCNN1DP51172 638 aa7.83□□□□□ -1.16
LINC01880-201ENST00000446593 NOGQ13253 232 aa7.83□□□□□ -1.16
LINC01880-201ENST00000446593 C3orf67Q6ZVT6 689 aa7.83□□□□□ -1.16
LINC01880-201ENST00000446593 IL17REQ8NFR9 667 aa7.83□□□□□ -1.16
LINC01880-201ENST00000446593 ADARB2Q9NS39 739 aaKnown RBP7.83□□□□□ -1.16
LINC01880-201ENST00000446593 MRC1P22897 1456 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 PRPF38BQ5VTL8 546 aaKnown RBP7.82□□□□□ -1.16
LINC01880-201ENST00000446593 CIAPIN1Q6FI81 312 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 NIM1KQ8IY84 436 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 ZC3H15Q8WU90 426 aaKnown RBP7.82□□□□□ -1.16
LINC01880-201ENST00000446593 RPGRQ92834 1020 aaKnown RBP7.82□□□□□ -1.16
LINC01880-201ENST00000446593 NYXQ9GZU5 481 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 VPS33BQ9H267 617 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 GPRC5DQ9NZD1 345 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 USP16Q9Y5T5 823 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms