RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
UBE2D4-206ENST00000446008 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
UBE2D4-206ENST00000446008 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
UBE2D4-206ENST00000446008 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
UBE2D4-206ENST00000446008 EIF4G2P78344 907 aaKnown RBP eCLIP13.39□□□□□ -0.27
UBE2D4-206ENST00000446008 CNBD1Q8NA66 436 aa13.39□□□□□ -0.27
UBE2D4-206ENST00000446008 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-206ENST00000446008 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
UBE2D4-206ENST00000446008 ADAMTSL1Q8N6G6 1762 aa13.38□□□□□ -0.27
UBE2D4-206ENST00000446008 RASSF10A6NK89 507 aa13.38□□□□□ -0.27
UBE2D4-206ENST00000446008 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
UBE2D4-206ENST00000446008 LBX1P52954 281 aa13.38□□□□□ -0.27
UBE2D4-206ENST00000446008 ST5P78524 1137 aa13.38□□□□□ -0.27
UBE2D4-206ENST00000446008 ZNF790Q6PG37 636 aa13.38□□□□□ -0.27
UBE2D4-206ENST00000446008 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
UBE2D4-206ENST00000446008 CCDC93Q567U6 631 aa13.37□□□□□ -0.27
UBE2D4-206ENST00000446008 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
UBE2D4-206ENST00000446008 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 KLRG2A4D1S0 409 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 POTEFA5A3E0 1075 aa13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 DEFB115Q30KQ5 88 aa13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 COLQQ9Y215 455 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 ZNF330Q9Y3S2 320 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-206ENST00000446008 NPHP1O15259 732 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 A1BGP04217 495 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 HSPA8P11142 646 aaKnown RBP13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 PLCG2P16885 1265 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 MAP2K1Q02750 393 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 TEFQ10587 303 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 LHX8Q68G74 356 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 CLEC4GQ6UXB4 293 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 ABHD8Q96I13 439 aa13.35□□□□□ -0.27
UBE2D4-206ENST00000446008 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 FZD9O00144 591 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 NPR1P16066 1061 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 EPHX2P34913 555 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 ZNF541Q9H0D2 1346 aa13.34□□□□□ -0.27
UBE2D4-206ENST00000446008 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.28
UBE2D4-206ENST00000446008 GAS2L2Q8NHY3 880 aa13.33□□□□□ -0.28
UBE2D4-206ENST00000446008 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
UBE2D4-206ENST00000446008 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
UBE2D4-206ENST00000446008 NBPF5PQ86XG9 351 aaPredicted RBP13.32□□□□□ -0.28
UBE2D4-206ENST00000446008 GPC2Q8N158 579 aa13.32□□□□□ -0.28
UBE2D4-206ENST00000446008 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
UBE2D4-206ENST00000446008 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
UBE2D4-206ENST00000446008 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 RGS19P49795 217 aa13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 MAP1SQ66K74 1059 aaPredicted RBP13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
UBE2D4-206ENST00000446008 ALDH1B1P30837 517 aa13.3□□□□□ -0.28
UBE2D4-206ENST00000446008 SYNE4Q8N205 404 aa13.3□□□□□ -0.28
UBE2D4-206ENST00000446008 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBE2D4-206ENST00000446008 ZNF652Q9Y2D9 606 aa13.3□□□□□ -0.28
UBE2D4-206ENST00000446008 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 KCNQ3O43525 872 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 PSMD1Q99460 953 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 SNED1Q8TER0 1413 aa13.29□□□□□ -0.28
UBE2D4-206ENST00000446008 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
UBE2D4-206ENST00000446008 MLLT1Q03111 559 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-206ENST00000446008 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-206ENST00000446008 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
UBE2D4-206ENST00000446008 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
UBE2D4-206ENST00000446008 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-206ENST00000446008 ECE1P42892 770 aa13.27□□□□□ -0.29
UBE2D4-206ENST00000446008 CC2D2BQ6DHV5 1058 aa13.27□□□□□ -0.29
UBE2D4-206ENST00000446008 JDP2Q8WYK2 163 aa13.27□□□□□ -0.29
UBE2D4-206ENST00000446008 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
UBE2D4-206ENST00000446008 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
UBE2D4-206ENST00000446008 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
UBE2D4-206ENST00000446008 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
UBE2D4-206ENST00000446008 CAPNS2Q96L46 248 aa13.26□□□□□ -0.29
UBE2D4-206ENST00000446008 GPR101Q96P66 508 aaPredicted RBP13.26□□□□□ -0.29
UBE2D4-206ENST00000446008 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
UBE2D4-206ENST00000446008 LTBP1Q14766 1721 aa13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-206ENST00000446008 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms