RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 SRCIN1Q9C0H9 1055 aa11.09□□□□□ -0.63
FXR1-203ENST00000445140 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
FXR1-203ENST00000445140 IGKV5-2P06315 115 aa11.09□□□□□ -0.63
FXR1-203ENST00000445140 TM4SF1P30408 202 aa11.09□□□□□ -0.63
FXR1-203ENST00000445140 CASP7P55210 303 aa11.09□□□□□ -0.63
FXR1-203ENST00000445140 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
FXR1-203ENST00000445140 EP400Q96L91 3159 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 H7C1W4 665 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 PCCAP05165 728 aaPredicted RBP11.08□□□□□ -0.64
FXR1-203ENST00000445140 GYS1P13807 737 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 MTX1Q13505 466 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 SLC10A5Q5PT55 438 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 GNAI3P08754 354 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 DEFB132Q7Z7B7 95 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 NLGN1Q8N2Q7 840 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 BCL2L13Q9BXK5 485 aa11.08□□□□□ -0.64
FXR1-203ENST00000445140 SUPT16HQ9Y5B9 1047 aaKnown RBP11.08□□□□□ -0.64
FXR1-203ENST00000445140 TNRC6CQ9HCJ0 1690 aaKnown RBP11.07□□□□□ -0.64
FXR1-203ENST00000445140 RLBP1P12271 317 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 GCKRQ14397 625 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
FXR1-203ENST00000445140 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 BRCA1P38398 1863 aaKnown RBP11.07□□□□□ -0.64
FXR1-203ENST00000445140 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
FXR1-203ENST00000445140 ZPR1O75312 459 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 ANXA1P04083 346 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 RFC4P35249 363 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 COL23A1Q86Y22 540 aaPredicted RBP11.07□□□□□ -0.64
FXR1-203ENST00000445140 TMEM57Q8N5G2 664 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 NYXQ9GZU5 481 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 CWC25Q9NXE8 425 aaPredicted RBP11.07□□□□□ -0.64
FXR1-203ENST00000445140 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
FXR1-203ENST00000445140 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
FXR1-203ENST00000445140 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
FXR1-203ENST00000445140 NTSR2O95665 410 aa11.06□□□□□ -0.64
FXR1-203ENST00000445140 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
FXR1-203ENST00000445140 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
FXR1-203ENST00000445140 TFCP2L1Q9NZI6 479 aa11.06□□□□□ -0.64
FXR1-203ENST00000445140 COL11A2P13942 1736 aaPredicted RBP11.06□□□□□ -0.64
FXR1-203ENST00000445140 HLFQ16534 295 aa11.05□□□□□ -0.64
FXR1-203ENST00000445140 PPP1R42Q7Z4L9 355 aa11.05□□□□□ -0.64
FXR1-203ENST00000445140 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
FXR1-203ENST00000445140 GRM8O00222 908 aa11.05□□□□□ -0.64
FXR1-203ENST00000445140 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
FXR1-203ENST00000445140 USP44Q9H0E7 712 aa11.05□□□□□ -0.64
FXR1-203ENST00000445140 ARAP2Q8WZ64 1704 aa11.05□□□□□ -0.64
FXR1-203ENST00000445140 SOCS7O14512 581 aa11.04□□□□□ -0.64
FXR1-203ENST00000445140 USPL1Q5W0Q7 1092 aa11.04□□□□□ -0.64
FXR1-203ENST00000445140 MYD88Q99836 296 aa11.04□□□□□ -0.64
FXR1-203ENST00000445140 TCERG1O14776 1098 aaKnown RBP11.04□□□□□ -0.64
FXR1-203ENST00000445140 KCNQ4P56696 695 aa11.04□□□□□ -0.64
FXR1-203ENST00000445140 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
FXR1-203ENST00000445140 F6X3S4 739 aa11.03□□□□□ -0.64
FXR1-203ENST00000445140 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
FXR1-203ENST00000445140 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
FXR1-203ENST00000445140 POLRMTO00411 1230 aaKnown RBP11.03□□□□□ -0.64
FXR1-203ENST00000445140 PIP4K2AP48426 406 aaPredicted RBP11.03□□□□□ -0.64
FXR1-203ENST00000445140 PANK1Q8TE04 598 aa11.03□□□□□ -0.64
FXR1-203ENST00000445140 UTP14AQ9BVJ6 771 aaKnown RBP11.03□□□□□ -0.64
FXR1-203ENST00000445140 LTBP1Q14766 1721 aa11.03□□□□□ -0.64
FXR1-203ENST00000445140 SH3TC1Q8TE82 1336 aa11.03□□□□□ -0.64
FXR1-203ENST00000445140 NFIXQ14938 502 aa11.02□□□□□ -0.64
FXR1-203ENST00000445140 C20orf194Q5TEA3 1177 aa11.02□□□□□ -0.64
FXR1-203ENST00000445140 TBC1D9BQ66K14 1250 aa11.02□□□□□ -0.64
FXR1-203ENST00000445140 MTFR1LQ9H019 292 aa11.02□□□□□ -0.64
FXR1-203ENST00000445140 TNNQ9UQP3 1299 aa11.02□□□□□ -0.64
FXR1-203ENST00000445140 CSF1RP07333 972 aa11.02□□□□□ -0.65
FXR1-203ENST00000445140 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
FXR1-203ENST00000445140 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.65
FXR1-203ENST00000445140 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
FXR1-203ENST00000445140 SF3B3Q15393 1217 aaKnown RBP11.02□□□□□ -0.65
FXR1-203ENST00000445140 CLUAP1Q96AJ1 413 aa11.02□□□□□ -0.65
FXR1-203ENST00000445140 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
FXR1-203ENST00000445140 ARFGEF1Q9Y6D6 1849 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 PLIN1O60240 522 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 GNAI2P04899 355 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 NEFLP07196 543 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
FXR1-203ENST00000445140 POLA2Q14181 598 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 CRY2Q49AN0 593 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 SUSD4Q5VX71 490 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
FXR1-203ENST00000445140 PDE8AO60658 829 aa11□□□□□ -0.65
FXR1-203ENST00000445140 UBTFL1P0CB47 393 aaPredicted RBP11□□□□□ -0.65
FXR1-203ENST00000445140 DDR1Q08345 913 aa11□□□□□ -0.65
FXR1-203ENST00000445140 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
FXR1-203ENST00000445140 ANKRD44Q8N8A2 993 aa11□□□□□ -0.65
FXR1-203ENST00000445140 KAZALD1Q96I82 304 aa11□□□□□ -0.65
FXR1-203ENST00000445140 COG6Q9Y2V7 657 aa11□□□□□ -0.65
FXR1-203ENST00000445140 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
FXR1-203ENST00000445140 MEIS3Q99687 375 aa11□□□□□ -0.65
FXR1-203ENST00000445140 ABCC12Q96J65 1359 aa10.99□□□□□ -0.65
FXR1-203ENST00000445140 FOXO4P98177 505 aa10.99□□□□□ -0.65
FXR1-203ENST00000445140 HOXA10P31260 410 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms