RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PDGFDQ9GZP0 370 aaPredicted RBP19.06■□□□□ 0.64
CCNE1-203ENST00000444983 NIP7Q9Y221 180 aaKnown RBP eCLIP19.06■□□□□ 0.64
CCNE1-203ENST00000444983 H7C1W4 665 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 GRM8O00222 908 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 TM4SF1P30408 202 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 AAMPQ13685 434 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 PARP10Q53GL7 1025 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 NFIXQ14938 502 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 ERICH6BQ5W0A0 696 aa19.05■□□□□ 0.64
CCNE1-203ENST00000444983 CHMP4BQ9H444 224 aaKnown RBP19.05■□□□□ 0.64
CCNE1-203ENST00000444983 CASZ1Q86V15 1759 aa19.04■□□□□ 0.64
CCNE1-203ENST00000444983 SUSD4Q5VX71 490 aa19.04■□□□□ 0.64
CCNE1-203ENST00000444983 NLGN1Q8N2Q7 840 aa19.04■□□□□ 0.64
CCNE1-203ENST00000444983 GNAI3P08754 354 aa19.03■□□□□ 0.64
CCNE1-203ENST00000444983 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
CCNE1-203ENST00000444983 SETDB2Q96T68 719 aa19.03■□□□□ 0.64
CCNE1-203ENST00000444983 C9orf78Q9NZ63 289 aaPredicted RBP19.03■□□□□ 0.64
CCNE1-203ENST00000444983 NTSR2O95665 410 aa19.02■□□□□ 0.64
CCNE1-203ENST00000444983 PCCAP05165 728 aaPredicted RBP19.02■□□□□ 0.64
CCNE1-203ENST00000444983 SLC16A10Q8TF71 515 aa19.02■□□□□ 0.64
CCNE1-203ENST00000444983 KAZALD1Q96I82 304 aa19.02■□□□□ 0.64
CCNE1-203ENST00000444983 MSH5O43196 834 aa19.01■□□□□ 0.63
CCNE1-203ENST00000444983 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
CCNE1-203ENST00000444983 BICDL1Q6ZP65 573 aa19.01■□□□□ 0.63
CCNE1-203ENST00000444983 UBE3BQ7Z3V4 1068 aa19.01■□□□□ 0.63
CCNE1-203ENST00000444983 NRXN2Q9P2S2 1712 aa19.01■□□□□ 0.63
CCNE1-203ENST00000444983 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
CCNE1-203ENST00000444983 UBTFL1P0CB47 393 aaPredicted RBP19■□□□□ 0.63
CCNE1-203ENST00000444983 DDR1Q08345 913 aa19■□□□□ 0.63
CCNE1-203ENST00000444983 PPP1R42Q7Z4L9 355 aa19■□□□□ 0.63
CCNE1-203ENST00000444983 FAM89AQ96GI7 184 aa19■□□□□ 0.63
CCNE1-203ENST00000444983 UTP14AQ9BVJ6 771 aaKnown RBP19■□□□□ 0.63
CCNE1-203ENST00000444983 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
CCNE1-203ENST00000444983 POLRMTO00411 1230 aaKnown RBP18.99■□□□□ 0.63
CCNE1-203ENST00000444983 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
CCNE1-203ENST00000444983 SYNE4Q8N205 404 aa18.99■□□□□ 0.63
CCNE1-203ENST00000444983 JARID2Q92833 1246 aaPredicted RBP18.99■□□□□ 0.63
CCNE1-203ENST00000444983 GNAI2P04899 355 aa18.98■□□□□ 0.63
CCNE1-203ENST00000444983 PCDHB15Q9Y5E8 787 aa18.98■□□□□ 0.63
CCNE1-203ENST00000444983 DDX60Q8IY21 1712 aaKnown RBP18.98■□□□□ 0.63
CCNE1-203ENST00000444983 SH3TC1Q8TE82 1336 aa18.98■□□□□ 0.63
CCNE1-203ENST00000444983 SUCLG2Q96I99 432 aa18.98■□□□□ 0.63
CCNE1-203ENST00000444983 PLA2G12BQ9BX93 195 aa18.98■□□□□ 0.63
CCNE1-203ENST00000444983 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
CCNE1-203ENST00000444983 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
CCNE1-203ENST00000444983 LAMB2P55268 1798 aa18.97■□□□□ 0.63
CCNE1-203ENST00000444983 EPHA10Q5JZY3 1008 aa18.97■□□□□ 0.63
CCNE1-203ENST00000444983 SLC10A5Q5PT55 438 aa18.97■□□□□ 0.63
CCNE1-203ENST00000444983 TPTE2Q6XPS3 522 aa18.97■□□□□ 0.63
CCNE1-203ENST00000444983 NYXQ9GZU5 481 aa18.97■□□□□ 0.63
CCNE1-203ENST00000444983 RTL5Q5HYW3 569 aaPredicted RBP18.96■□□□□ 0.63
CCNE1-203ENST00000444983 NBPF5PQ86XG9 351 aaPredicted RBP18.96■□□□□ 0.63
CCNE1-203ENST00000444983 HDAC5Q9UQL6 1122 aa18.96■□□□□ 0.63
CCNE1-203ENST00000444983 FAM177BA6PVY3 158 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 SERPINB2P05120 415 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 MMP10P09238 476 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 FOXO4P98177 505 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 MTX1Q13505 466 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 RABL6Q3YEC7 729 aaPredicted RBP18.95■□□□□ 0.62
CCNE1-203ENST00000444983 MSL1Q68DK7 614 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 NUTM1Q86Y26 1132 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 MYH3P11055 1940 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 IRS4O14654 1257 aaPredicted RBP18.95■□□□□ 0.62
CCNE1-203ENST00000444983 ERFEQ4G0M1 354 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 CEP85Q6P2H3 762 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 SIRT2Q8IXJ6 389 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 ANKRD44Q8N8A2 993 aa18.95■□□□□ 0.62
CCNE1-203ENST00000444983 SOCS7O14512 581 aa18.94■□□□□ 0.62
CCNE1-203ENST00000444983 PRR5LQ6MZQ0 368 aa18.94■□□□□ 0.62
CCNE1-203ENST00000444983 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
CCNE1-203ENST00000444983 BICC1Q9H694 974 aaKnown RBP18.94■□□□□ 0.62
CCNE1-203ENST00000444983 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
CCNE1-203ENST00000444983 RIC1Q4ADV7 1423 aa18.93■□□□□ 0.62
CCNE1-203ENST00000444983 PSDA5PKW4 1024 aaPredicted RBP18.93■□□□□ 0.62
CCNE1-203ENST00000444983 CSF1RP07333 972 aa18.93■□□□□ 0.62
CCNE1-203ENST00000444983 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
CCNE1-203ENST00000444983 ATP8B2P98198 1209 aa18.92■□□□□ 0.62
CCNE1-203ENST00000444983 CNBD1Q8NA66 436 aa18.92■□□□□ 0.62
CCNE1-203ENST00000444983 MTFR1LQ9H019 292 aa18.92■□□□□ 0.62
CCNE1-203ENST00000444983 PDE8AO60658 829 aa18.92■□□□□ 0.62
CCNE1-203ENST00000444983 HCLS1P14317 486 aaPredicted RBP18.92■□□□□ 0.62
CCNE1-203ENST00000444983 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
CCNE1-203ENST00000444983 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
CCNE1-203ENST00000444983 PARP3Q9Y6F1 533 aa18.91■□□□□ 0.62
CCNE1-203ENST00000444983 TNRC6CQ9HCJ0 1690 aaKnown RBP18.9■□□□□ 0.62
CCNE1-203ENST00000444983 PNMA6EA0A0J9YXQ4 647 aa18.9■□□□□ 0.62
CCNE1-203ENST00000444983 ZBTB7AO95365 584 aa18.9■□□□□ 0.62
CCNE1-203ENST00000444983 HSP90B1P14625 803 aaKnown RBP18.9■□□□□ 0.62
CCNE1-203ENST00000444983 SSH3Q8TE77 659 aa18.9■□□□□ 0.62
CCNE1-203ENST00000444983 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
CCNE1-203ENST00000444983 ANKRD31Q8N7Z5 1873 aa18.9■□□□□ 0.62
CCNE1-203ENST00000444983 KLRG2A4D1S0 409 aaPredicted RBP18.89■□□□□ 0.61
CCNE1-203ENST00000444983 GTF2E1P29083 439 aaPredicted RBP18.89■□□□□ 0.61
CCNE1-203ENST00000444983 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
CCNE1-203ENST00000444983 POLA2Q14181 598 aa18.89■□□□□ 0.61
CCNE1-203ENST00000444983 LMBR1LQ6UX01 489 aa18.89■□□□□ 0.61
CCNE1-203ENST00000444983 CTSWP56202 376 aa18.89■□□□□ 0.61
CCNE1-203ENST00000444983 SF3B3Q15393 1217 aaKnown RBP18.89■□□□□ 0.61
CCNE1-203ENST00000444983 C3orf67Q6ZVT6 689 aa18.89■□□□□ 0.61
CCNE1-203ENST00000444983 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms