RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 MAPTP10636 758 aaKnown RBP8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 ARSDP51689 593 aa8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 GPR152Q8TDT2 470 aa8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 EDEM1Q92611 657 aa8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 ABHD17AQ96GS6 310 aa8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 BRD7Q9NPI1 651 aa8.13□□□□□ -1.11
HMGB3P6-201ENST00000444896 DCDC2BA2VCK2 349 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 PDGFAP04085 211 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 MZF1P28698 734 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 KCNQ4P56696 695 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 CFHR5Q9BXR6 569 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 PODXL2Q9NZ53 605 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 KCNMB2Q9Y691 235 aa8.12□□□□□ -1.11
HMGB3P6-201ENST00000444896 DNM1Q05193 864 aaKnown RBP8.11□□□□□ -1.11
HMGB3P6-201ENST00000444896 AAMPQ13685 434 aa8.11□□□□□ -1.11
HMGB3P6-201ENST00000444896 RGL4Q8IZJ4 473 aa8.11□□□□□ -1.11
HMGB3P6-201ENST00000444896 GGNBP2Q9H3C7 697 aa8.11□□□□□ -1.11
HMGB3P6-201ENST00000444896 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 MARSP56192 900 aaKnown RBP8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 CCDC27Q2M243 656 aa8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 DCTN4Q9UJW0 460 aa8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 ATXN7L1Q9ULK2 861 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 KCNH4Q9UQ05 1017 aa8.1□□□□□ -1.11
HMGB3P6-201ENST00000444896 IGHA2P01877 340 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 VSIG8P0DPA2 414 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 CTBSQ01459 385 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 LAMC2Q13753 1193 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 GAS6Q14393 721 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 TRIP4Q15650 581 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 DNAJC14Q6Y2X3 702 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 BRPF3Q9ULD4 1205 aa8.09□□□□□ -1.11
HMGB3P6-201ENST00000444896 CD33P20138 364 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 FGFR3P22607 806 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 MAPK1P28482 360 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 GMPRP36959 345 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 GJD3Q8N144 294 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 RBCK1Q9BYM8 510 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 MARK1Q9P0L2 795 aa8.08□□□□□ -1.12
HMGB3P6-201ENST00000444896 A6NHS1 94 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 C2CD2LO14523 706 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 NDUFB5O43674 189 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 EGFRP00533 1210 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 FAM182BQ5T319 152 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 CITED4Q96RK1 184 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 FAM129BQ96TA1 746 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 SLC30A3Q99726 388 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 C11orf16Q9NQ32 467 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 PHF24Q9UPV7 400 aa8.07□□□□□ -1.12
HMGB3P6-201ENST00000444896 EPB42P16452 691 aa8.06□□□□□ -1.12
HMGB3P6-201ENST00000444896 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
HMGB3P6-201ENST00000444896 XYLBO75191 536 aa8.05□□□□□ -1.12
HMGB3P6-201ENST00000444896 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
HMGB3P6-201ENST00000444896 XKR5Q6UX68 686 aa8.05□□□□□ -1.12
HMGB3P6-201ENST00000444896 ASB16Q96NS5 453 aa8.05□□□□□ -1.12
HMGB3P6-201ENST00000444896 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
HMGB3P6-201ENST00000444896 UBAP1LF5GYI3 381 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 USP5P45974 858 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 KRT76Q01546 638 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 CCINQ13939 588 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 C8orf34Q49A92 452 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
HMGB3P6-201ENST00000444896 GPR182O15218 404 aa8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 SASH3O75995 380 aa8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 RPLP1P05386 114 aaKnown RBP8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 PCSK2P16519 638 aa8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 TARSP26639 723 aaKnown RBP8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 DSC3Q14574 896 aa8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 ZFATQ9P243 1243 aa8.03□□□□□ -1.12
HMGB3P6-201ENST00000444896 ANKRD33BA6NCL7 494 aa8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 MX2P20592 715 aa8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 KRT25Q7Z3Z0 450 aa8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 RAB44Q7Z6P3 723 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 RGS22Q8NE09 1264 aa8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 KLF15Q9UIH9 416 aa8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 FNDC3AQ9Y2H6 1198 aaKnown RBP8.02□□□□□ -1.13
HMGB3P6-201ENST00000444896 TREHO43280 583 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 PDE3BQ13370 1112 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 PDE12Q6L8Q7 609 aaKnown RBP8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 NLRP13Q86W25 1043 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 TMC1Q8TDI8 760 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 ALKBH8Q96BT7 664 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms