RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
COMMD1-203ENST00000444166 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
COMMD1-203ENST00000444166 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
COMMD1-203ENST00000444166 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
COMMD1-203ENST00000444166 CC2D2BQ6DHV5 1058 aa13.62□□□□□ -0.23
COMMD1-203ENST00000444166 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
COMMD1-203ENST00000444166 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
COMMD1-203ENST00000444166 HHIPL1Q96JK4 782 aa13.62□□□□□ -0.23
COMMD1-203ENST00000444166 BTBD11A6QL63 1104 aa13.6□□□□□ -0.23
COMMD1-203ENST00000444166 HOXA10P31260 410 aaPredicted RBP13.6□□□□□ -0.23
COMMD1-203ENST00000444166 DGKZQ13574 1117 aa13.6□□□□□ -0.23
COMMD1-203ENST00000444166 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
COMMD1-203ENST00000444166 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
COMMD1-203ENST00000444166 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
COMMD1-203ENST00000444166 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
COMMD1-203ENST00000444166 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
COMMD1-203ENST00000444166 CELF2O95319 508 aaKnown RBP13.59□□□□□ -0.23
COMMD1-203ENST00000444166 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
COMMD1-203ENST00000444166 HLFQ16534 295 aa13.59□□□□□ -0.23
COMMD1-203ENST00000444166 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
COMMD1-203ENST00000444166 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
COMMD1-203ENST00000444166 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
COMMD1-203ENST00000444166 PGAP2Q9UHJ9 254 aa13.59□□□□□ -0.23
COMMD1-203ENST00000444166 KIF7Q2M1P5 1343 aa13.59□□□□□ -0.23
COMMD1-203ENST00000444166 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
COMMD1-203ENST00000444166 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
COMMD1-203ENST00000444166 ZIC5Q96T25 663 aa13.57□□□□□ -0.24
COMMD1-203ENST00000444166 GLIS2Q9BZE0 524 aaPredicted RBP13.57□□□□□ -0.24
COMMD1-203ENST00000444166 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
COMMD1-203ENST00000444166 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
COMMD1-203ENST00000444166 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
COMMD1-203ENST00000444166 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
COMMD1-203ENST00000444166 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
COMMD1-203ENST00000444166 IBTKQ9P2D0 1353 aaPredicted RBP13.56□□□□□ -0.24
COMMD1-203ENST00000444166 NPC1L1Q9UHC9 1359 aa13.56□□□□□ -0.24
COMMD1-203ENST00000444166 U2SURPO15042 1029 aaKnown RBP13.55□□□□□ -0.24
COMMD1-203ENST00000444166 CXCL9Q07325 125 aa13.55□□□□□ -0.24
COMMD1-203ENST00000444166 NOGQ13253 232 aa13.55□□□□□ -0.24
COMMD1-203ENST00000444166 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
COMMD1-203ENST00000444166 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
COMMD1-203ENST00000444166 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
COMMD1-203ENST00000444166 GMPSP49915 693 aaPredicted RBP13.54□□□□□ -0.24
COMMD1-203ENST00000444166 HIRAP54198 1017 aaPredicted RBP13.54□□□□□ -0.24
COMMD1-203ENST00000444166 AOC3Q16853 763 aa13.54□□□□□ -0.24
COMMD1-203ENST00000444166 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
COMMD1-203ENST00000444166 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
COMMD1-203ENST00000444166 VPS33BQ9H267 617 aa13.54□□□□□ -0.24
COMMD1-203ENST00000444166 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
COMMD1-203ENST00000444166 NUP98P52948 1817 aa13.53□□□□□ -0.24
COMMD1-203ENST00000444166 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
COMMD1-203ENST00000444166 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
COMMD1-203ENST00000444166 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
COMMD1-203ENST00000444166 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
COMMD1-203ENST00000444166 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
COMMD1-203ENST00000444166 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
COMMD1-203ENST00000444166 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
COMMD1-203ENST00000444166 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
COMMD1-203ENST00000444166 SOX10P56693 466 aa13.52□□□□□ -0.25
COMMD1-203ENST00000444166 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
COMMD1-203ENST00000444166 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
COMMD1-203ENST00000444166 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
COMMD1-203ENST00000444166 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
COMMD1-203ENST00000444166 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.25
COMMD1-203ENST00000444166 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
COMMD1-203ENST00000444166 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
COMMD1-203ENST00000444166 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
COMMD1-203ENST00000444166 FAM155AB1AL88 458 aaPredicted RBP13.51□□□□□ -0.25
COMMD1-203ENST00000444166 MCM10Q7L590 875 aa13.51□□□□□ -0.25
COMMD1-203ENST00000444166 ZNF408Q9H9D4 720 aa13.51□□□□□ -0.25
COMMD1-203ENST00000444166 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
COMMD1-203ENST00000444166 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
COMMD1-203ENST00000444166 NTSR2O95665 410 aa13.5□□□□□ -0.25
COMMD1-203ENST00000444166 HUNKP57058 714 aa13.5□□□□□ -0.25
COMMD1-203ENST00000444166 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
COMMD1-203ENST00000444166 GPTP24298 496 aa13.49□□□□□ -0.25
COMMD1-203ENST00000444166 TTLL7Q6ZT98 887 aa13.49□□□□□ -0.25
COMMD1-203ENST00000444166 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
COMMD1-203ENST00000444166 SHTN1A0MZ66 631 aa13.48□□□□□ -0.25
COMMD1-203ENST00000444166 KIAA2012Q0VF49 1180 aa13.48□□□□□ -0.25
COMMD1-203ENST00000444166 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
COMMD1-203ENST00000444166 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
COMMD1-203ENST00000444166 ABCC4O15439 1325 aa13.47□□□□□ -0.25
COMMD1-203ENST00000444166 RAD17O75943 681 aa13.47□□□□□ -0.25
COMMD1-203ENST00000444166 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
COMMD1-203ENST00000444166 RGMBQ6NW40 437 aa13.47□□□□□ -0.25
COMMD1-203ENST00000444166 USP48Q86UV5 1035 aa13.47□□□□□ -0.25
COMMD1-203ENST00000444166 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
COMMD1-203ENST00000444166 RNF186Q9NXI6 227 aa13.47□□□□□ -0.25
COMMD1-203ENST00000444166 CNOT7Q9UIV1 285 aaKnown RBP13.47□□□□□ -0.25
COMMD1-203ENST00000444166 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
COMMD1-203ENST00000444166 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
COMMD1-203ENST00000444166 TNIP1Q15025 636 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
COMMD1-203ENST00000444166 SLC10A5Q5PT55 438 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.25
COMMD1-203ENST00000444166 DUOX1Q9NRD9 1551 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms