RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PDE4AP27815 886 aa11.79□□□□□ -0.52
SMPD4P1-203ENST00000443839 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
SMPD4P1-203ENST00000443839 POLA2Q14181 598 aa11.79□□□□□ -0.52
SMPD4P1-203ENST00000443839 H7C1W4 665 aa11.78□□□□□ -0.52
SMPD4P1-203ENST00000443839 SURF6O75683 361 aaKnown RBP11.78□□□□□ -0.52
SMPD4P1-203ENST00000443839 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
SMPD4P1-203ENST00000443839 NUP98P52948 1817 aa11.78□□□□□ -0.52
SMPD4P1-203ENST00000443839 GNPATO15228 680 aa11.78□□□□□ -0.52
SMPD4P1-203ENST00000443839 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
SMPD4P1-203ENST00000443839 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.52
SMPD4P1-203ENST00000443839 CASP7P55210 303 aa11.77□□□□□ -0.52
SMPD4P1-203ENST00000443839 EPHA10Q5JZY3 1008 aa11.77□□□□□ -0.52
SMPD4P1-203ENST00000443839 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.52
SMPD4P1-203ENST00000443839 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.53
SMPD4P1-203ENST00000443839 CAMTA2O94983 1202 aa11.77□□□□□ -0.53
SMPD4P1-203ENST00000443839 OS9Q13438 667 aaPredicted RBP11.77□□□□□ -0.53
SMPD4P1-203ENST00000443839 HSP90AB4PQ58FF6 505 aa11.77□□□□□ -0.53
SMPD4P1-203ENST00000443839 NLRP10Q86W26 655 aa11.77□□□□□ -0.53
SMPD4P1-203ENST00000443839 ZNF652Q9Y2D9 606 aa11.77□□□□□ -0.53
SMPD4P1-203ENST00000443839 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
SMPD4P1-203ENST00000443839 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
SMPD4P1-203ENST00000443839 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
SMPD4P1-203ENST00000443839 AK7Q96M32 723 aa11.76□□□□□ -0.53
SMPD4P1-203ENST00000443839 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
SMPD4P1-203ENST00000443839 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 C4BP0C0L5 1744 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 RABL6Q3YEC7 729 aaPredicted RBP11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
SMPD4P1-203ENST00000443839 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 ZPR1O75312 459 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 APBA3O96018 575 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 FOXO4P98177 505 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMPD4P1-203ENST00000443839 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 PHF14O94880 888 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 PARP10Q53GL7 1025 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 RHPN1Q8TCX5 695 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 SIL1Q9H173 461 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 IL1RAPL2Q9NP60 686 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
SMPD4P1-203ENST00000443839 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 TXNRD1Q16881 649 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 PLEKHM2Q8IWE5 1019 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 SCN7AQ01118 1682 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 IRS4O14654 1257 aaPredicted RBP11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 RFC4P35249 363 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 TRAPPC3LQ5T215 181 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 SYNE4Q8N205 404 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
SMPD4P1-203ENST00000443839 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 RGL2O15211 777 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 SUSD4Q5VX71 490 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 AMIGO3Q86WK7 504 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
SMPD4P1-203ENST00000443839 PLSCR1O15162 318 aa11.71□□□□□ -0.54
SMPD4P1-203ENST00000443839 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.54
SMPD4P1-203ENST00000443839 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.54
SMPD4P1-203ENST00000443839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
SMPD4P1-203ENST00000443839 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-203ENST00000443839 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
SMPD4P1-203ENST00000443839 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
SMPD4P1-203ENST00000443839 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
SMPD4P1-203ENST00000443839 HSP90B1P14625 803 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 MX1P20591 662 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 CTSWP56202 376 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 PROM2Q8N271 834 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 CCDC85AQ96PX6 553 aaPredicted RBP11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 MYH3P11055 1940 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 PDE8AO60658 829 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 NTSR2O95665 410 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms