RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 ALDH1B1P30837 517 aa26.44■■□□□ 1.82
UBE2D4-205ENST00000443780 TCIRG1Q13488 830 aa26.44■■□□□ 1.82
UBE2D4-205ENST00000443780 NCBP3Q53F19 620 aaKnown RBP26.44■■□□□ 1.82
UBE2D4-205ENST00000443780 UTP14AQ9BVJ6 771 aaKnown RBP26.44■■□□□ 1.82
UBE2D4-205ENST00000443780 NMRK2Q9NPI5 230 aa26.44■■□□□ 1.82
UBE2D4-205ENST00000443780 LTBP3Q9NS15 1303 aa26.43■■□□□ 1.82
UBE2D4-205ENST00000443780 C8orf58Q8NAV2 365 aa26.43■■□□□ 1.82
UBE2D4-205ENST00000443780 TAOK3Q9H2K8 898 aa26.43■■□□□ 1.82
UBE2D4-205ENST00000443780 LAMB2P55268 1798 aa26.43■■□□□ 1.82
UBE2D4-205ENST00000443780 KDM2BQ8NHM5 1336 aa26.42■■□□□ 1.82
UBE2D4-205ENST00000443780 ANKRD13DQ6ZTN6 518 aa26.42■■□□□ 1.82
UBE2D4-205ENST00000443780 NLRP10Q86W26 655 aa26.42■■□□□ 1.82
UBE2D4-205ENST00000443780 PLBD2Q8NHP8 589 aa26.42■■□□□ 1.82
UBE2D4-205ENST00000443780 RNF123Q5XPI4 1314 aa26.4■■□□□ 1.82
UBE2D4-205ENST00000443780 HOXA10P31260 410 aaPredicted RBP26.4■■□□□ 1.82
UBE2D4-205ENST00000443780 CCDC93Q567U6 631 aa26.4■■□□□ 1.82
UBE2D4-205ENST00000443780 SLC10A5Q5PT55 438 aa26.4■■□□□ 1.82
UBE2D4-205ENST00000443780 RPGRQ92834 1020 aaKnown RBP26.4■■□□□ 1.82
UBE2D4-205ENST00000443780 C3orf67Q6ZVT6 689 aa26.39■■□□□ 1.82
UBE2D4-205ENST00000443780 TSR2Q969E8 191 aaKnown RBP26.39■■□□□ 1.82
UBE2D4-205ENST00000443780 OLFM4Q6UX06 510 aa26.38■■□□□ 1.81
UBE2D4-205ENST00000443780 NLRP3Q96P20 1036 aa26.38■■□□□ 1.81
UBE2D4-205ENST00000443780 IL16Q14005 1332 aa26.38■■□□□ 1.81
UBE2D4-205ENST00000443780 TSPYL6Q8N831 410 aa26.37■■□□□ 1.81
UBE2D4-205ENST00000443780 CHMP4AQ9BY43 222 aa26.37■■□□□ 1.81
UBE2D4-205ENST00000443780 GLTPD2A6NH11 291 aa26.36■■□□□ 1.81
UBE2D4-205ENST00000443780 RBM17Q96I25 401 aaKnown RBP26.36■■□□□ 1.81
UBE2D4-205ENST00000443780 CRAMP1Q96RY5 1269 aa26.36■■□□□ 1.81
UBE2D4-205ENST00000443780 TRMT112Q9UI30 125 aaKnown RBP26.36■■□□□ 1.81
UBE2D4-205ENST00000443780 CACNA1FO60840 1977 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 TOMM70O94826 608 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 CCDC30Q5VVM6 783 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 DDX60Q8IY21 1712 aaKnown RBP26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 RTKN2Q8IZC4 609 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 FAM9BQ8IZU0 186 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 SYNE4Q8N205 404 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 ISCA1Q9BUE6 129 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 PHAXQ9H814 394 aaKnown RBP26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 RRAGCQ9HB90 399 aa26.35■■□□□ 1.81
UBE2D4-205ENST00000443780 FKBP4Q02790 459 aaKnown RBP eCLIP26.34■■□□□ 1.81
UBE2D4-205ENST00000443780 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
UBE2D4-205ENST00000443780 SH3TC1Q8TE82 1336 aa26.34■■□□□ 1.81
UBE2D4-205ENST00000443780 TAF1P21675 1872 aa26.34■■□□□ 1.81
UBE2D4-205ENST00000443780 ATP5J2-PTCD1G3V325 749 aa26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 HCLS1P14317 486 aaPredicted RBP26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 GOLGA2Q08379 1002 aa26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 CC2D2BQ6DHV5 1058 aa26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 RIC3Q7Z5B4 369 aa26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 WDR63Q8IWG1 891 aa26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 ZNF428Q96B54 188 aa26.32■■□□□ 1.8
UBE2D4-205ENST00000443780 SNED1Q8TER0 1413 aa26.31■■□□□ 1.8
UBE2D4-205ENST00000443780 DPY19L2Q6NUT2 758 aa26.31■■□□□ 1.8
UBE2D4-205ENST00000443780 TRIM28Q13263 835 aaKnown RBP26.3■■□□□ 1.8
UBE2D4-205ENST00000443780 C16orf71Q8IYS4 520 aaPredicted RBP26.3■■□□□ 1.8
UBE2D4-205ENST00000443780 WDR90Q96KV7 1748 aa26.3■■□□□ 1.8
UBE2D4-205ENST00000443780 TWISTNBQ3B726 338 aaPredicted RBP26.29■■□□□ 1.8
UBE2D4-205ENST00000443780 ZNF277Q9NRM2 450 aaPredicted RBP26.29■■□□□ 1.8
UBE2D4-205ENST00000443780 PPEF1O14829 653 aaPredicted RBP26.28■■□□□ 1.8
UBE2D4-205ENST00000443780 RBM46Q8TBY0 533 aaKnown RBP26.28■■□□□ 1.8
UBE2D4-205ENST00000443780 PSMD1Q99460 953 aa26.28■■□□□ 1.8
UBE2D4-205ENST00000443780 VEGFAP15692 232 aaPredicted RBP26.27■■□□□ 1.8
UBE2D4-205ENST00000443780 HSPA6P17066 643 aa26.27■■□□□ 1.8
UBE2D4-205ENST00000443780 GRIPAP1Q4V328 841 aa26.27■■□□□ 1.8
UBE2D4-205ENST00000443780 FAM89AQ96GI7 184 aa26.27■■□□□ 1.8
UBE2D4-205ENST00000443780 ABCC4O15439 1325 aa26.27■■□□□ 1.8
UBE2D4-205ENST00000443780 FANCIQ9NVI1 1328 aa26.27■■□□□ 1.8
UBE2D4-205ENST00000443780 TCERG1O14776 1098 aaKnown RBP26.26■■□□□ 1.79
UBE2D4-205ENST00000443780 DDX58O95786 925 aaKnown RBP26.26■■□□□ 1.79
UBE2D4-205ENST00000443780 STK31Q9BXU1 1019 aa26.26■■□□□ 1.79
UBE2D4-205ENST00000443780 IARSP41252 1262 aaKnown RBP26.25■■□□□ 1.79
UBE2D4-205ENST00000443780 SLC51AQ86UW1 340 aa26.25■■□□□ 1.79
UBE2D4-205ENST00000443780 MYD88Q99836 296 aa26.25■■□□□ 1.79
UBE2D4-205ENST00000443780 DDX46Q7L014 1031 aaKnown RBP26.24■■□□□ 1.79
UBE2D4-205ENST00000443780 ATP6V0A2Q9Y487 856 aa26.24■■□□□ 1.79
UBE2D4-205ENST00000443780 POTECB2RU33 542 aa26.23■■□□□ 1.79
UBE2D4-205ENST00000443780 BBOX1O75936 387 aa26.23■■□□□ 1.79
UBE2D4-205ENST00000443780 RTL5Q5HYW3 569 aaPredicted RBP26.23■■□□□ 1.79
UBE2D4-205ENST00000443780 METTL22Q9BUU2 404 aaPredicted RBP26.23■■□□□ 1.79
UBE2D4-205ENST00000443780 DDNO94850 711 aaPredicted RBP26.22■■□□□ 1.79
UBE2D4-205ENST00000443780 CCDC191Q8NCU4 936 aa26.22■■□□□ 1.79
UBE2D4-205ENST00000443780 TMX4Q9H1E5 349 aaPredicted RBP26.22■■□□□ 1.79
UBE2D4-205ENST00000443780 MAP3K2Q9Y2U5 619 aa26.22■■□□□ 1.79
UBE2D4-205ENST00000443780 SCN4AP35499 1836 aa26.22■■□□□ 1.79
UBE2D4-205ENST00000443780 SF3B3Q15393 1217 aaKnown RBP26.21■■□□□ 1.79
UBE2D4-205ENST00000443780 KSR2Q6VAB6 950 aa26.21■■□□□ 1.79
UBE2D4-205ENST00000443780 ZBTB38Q8NAP3 1195 aaPredicted RBP26.21■■□□□ 1.79
UBE2D4-205ENST00000443780 SPINK5Q9NQ38 1064 aaPredicted RBP26.21■■□□□ 1.79
UBE2D4-205ENST00000443780 PI4KAP2A4QPH2 592 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 IRS4O14654 1257 aaPredicted RBP26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 SLC4A2P04920 1241 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 EXOSC9Q06265 439 aaKnown RBP26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 FSTL1Q12841 308 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 GRAPQ13588 217 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 G2E3Q7L622 706 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 SP8Q8IXZ3 490 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 PI4KAP1Q8N8J0 262 aa26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 GRAPLQ8TC17 118 aaPredicted RBP26.2■■□□□ 1.78
UBE2D4-205ENST00000443780 VAMP4O75379 141 aa26.19■■□□□ 1.78
UBE2D4-205ENST00000443780 CWC25Q9NXE8 425 aaPredicted RBP26.19■■□□□ 1.78
UBE2D4-205ENST00000443780 ZNF541Q9H0D2 1346 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms