RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 TCIRG1Q13488 830 aa21.13■□□□□ 0.97
ATG4C-205ENST00000443289 C16orf71Q8IYS4 520 aaPredicted RBP21.13■□□□□ 0.97
ATG4C-205ENST00000443289 RRAGCQ9HB90 399 aa21.13■□□□□ 0.97
ATG4C-205ENST00000443289 HYPKQ9NX55 129 aa21.13■□□□□ 0.97
ATG4C-205ENST00000443289 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
ATG4C-205ENST00000443289 HOXA10P31260 410 aaPredicted RBP21.12■□□□□ 0.97
ATG4C-205ENST00000443289 DPY19L2Q6NUT2 758 aa21.12■□□□□ 0.97
ATG4C-205ENST00000443289 RTKN2Q8IZC4 609 aa21.12■□□□□ 0.97
ATG4C-205ENST00000443289 RPGRQ92834 1020 aaKnown RBP21.12■□□□□ 0.97
ATG4C-205ENST00000443289 FER1L6Q2WGJ9 1857 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 ARFGEF2Q9Y6D5 1785 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 HSPA6P17066 643 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 CCDC27Q2M243 656 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 SLC10A5Q5PT55 438 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 ANKRD13DQ6ZTN6 518 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 PLBD2Q8NHP8 589 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 NLRP3Q96P20 1036 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 CHMP4AQ9BY43 222 aa21.11■□□□□ 0.97
ATG4C-205ENST00000443289 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
ATG4C-205ENST00000443289 FKBP4Q02790 459 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATG4C-205ENST00000443289 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
ATG4C-205ENST00000443289 NLRP10Q86W26 655 aa21.1■□□□□ 0.97
ATG4C-205ENST00000443289 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
ATG4C-205ENST00000443289 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
ATG4C-205ENST00000443289 CC2D2BQ6DHV5 1058 aa21.09■□□□□ 0.97
ATG4C-205ENST00000443289 CRAMP1Q96RY5 1269 aa21.09■□□□□ 0.97
ATG4C-205ENST00000443289 ELL2O00472 640 aaPredicted RBP21.08■□□□□ 0.97
ATG4C-205ENST00000443289 VEGFAP15692 232 aaPredicted RBP21.08■□□□□ 0.97
ATG4C-205ENST00000443289 CCDC88AQ3V6T2 1871 aa21.08■□□□□ 0.97
ATG4C-205ENST00000443289 CACNA1SQ13698 1873 aa21.07■□□□□ 0.96
ATG4C-205ENST00000443289 WWC1Q8IX03 1113 aa21.07■□□□□ 0.96
ATG4C-205ENST00000443289 TRMT112Q9UI30 125 aaKnown RBP21.07■□□□□ 0.96
ATG4C-205ENST00000443289 TNRC6CQ9HCJ0 1690 aaKnown RBP21.07■□□□□ 0.96
ATG4C-205ENST00000443289 GRIPAP1Q4V328 841 aa21.06■□□□□ 0.96
ATG4C-205ENST00000443289 OLFM4Q6UX06 510 aa21.06■□□□□ 0.96
ATG4C-205ENST00000443289 C8orf58Q8NAV2 365 aa21.06■□□□□ 0.96
ATG4C-205ENST00000443289 SH3TC1Q8TE82 1336 aa21.05■□□□□ 0.96
ATG4C-205ENST00000443289 FSTL1Q12841 308 aa21.05■□□□□ 0.96
ATG4C-205ENST00000443289 C3orf67Q6ZVT6 689 aa21.05■□□□□ 0.96
ATG4C-205ENST00000443289 ZNF277Q9NRM2 450 aaPredicted RBP21.05■□□□□ 0.96
ATG4C-205ENST00000443289 DICER1Q9UPY3 1922 aaKnown RBP21.04■□□□□ 0.96
ATG4C-205ENST00000443289 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
ATG4C-205ENST00000443289 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
ATG4C-205ENST00000443289 PSMD1Q99460 953 aa21.04■□□□□ 0.96
ATG4C-205ENST00000443289 ISCA1Q9BUE6 129 aa21.04■□□□□ 0.96
ATG4C-205ENST00000443289 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
ATG4C-205ENST00000443289 TIAM2Q8IVF5 1701 aa21.04■□□□□ 0.96
ATG4C-205ENST00000443289 IL16Q14005 1332 aa21.04■□□□□ 0.96
ATG4C-205ENST00000443289 HCLS1P14317 486 aaPredicted RBP21.03■□□□□ 0.96
ATG4C-205ENST00000443289 GOLGA2Q08379 1002 aa21.03■□□□□ 0.96
ATG4C-205ENST00000443289 TRIM28Q13263 835 aaKnown RBP21.03■□□□□ 0.96
ATG4C-205ENST00000443289 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
ATG4C-205ENST00000443289 APLP1P51693 650 aa21.02■□□□□ 0.96
ATG4C-205ENST00000443289 RIC3Q7Z5B4 369 aa21.02■□□□□ 0.96
ATG4C-205ENST00000443289 TMX4Q9H1E5 349 aaPredicted RBP21.02■□□□□ 0.96
ATG4C-205ENST00000443289 ANKRD36CQ5JPF3 1778 aa21.01■□□□□ 0.95
ATG4C-205ENST00000443289 POTECB2RU33 542 aa21.01■□□□□ 0.95
ATG4C-205ENST00000443289 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
ATG4C-205ENST00000443289 IARSP41252 1262 aaKnown RBP21.01■□□□□ 0.95
ATG4C-205ENST00000443289 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
ATG4C-205ENST00000443289 SMC1BQ8NDV3 1235 aa21.01■□□□□ 0.95
ATG4C-205ENST00000443289 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
ATG4C-205ENST00000443289 PHAXQ9H814 394 aaKnown RBP21.01■□□□□ 0.95
ATG4C-205ENST00000443289 BBOX1O75936 387 aa21■□□□□ 0.95
ATG4C-205ENST00000443289 DDNO94850 711 aaPredicted RBP21■□□□□ 0.95
ATG4C-205ENST00000443289 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
ATG4C-205ENST00000443289 SNED1Q8TER0 1413 aa20.99■□□□□ 0.95
ATG4C-205ENST00000443289 TCERG1O14776 1098 aaKnown RBP20.99■□□□□ 0.95
ATG4C-205ENST00000443289 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
ATG4C-205ENST00000443289 ATP6V0A2Q9Y487 856 aa20.99■□□□□ 0.95
ATG4C-205ENST00000443289 ABCC4O15439 1325 aa20.99■□□□□ 0.95
ATG4C-205ENST00000443289 WDR63Q8IWG1 891 aa20.98■□□□□ 0.95
ATG4C-205ENST00000443289 JDP2Q8WYK2 163 aa20.98■□□□□ 0.95
ATG4C-205ENST00000443289 FAM89AQ96GI7 184 aa20.98■□□□□ 0.95
ATG4C-205ENST00000443289 WDR90Q96KV7 1748 aa20.98■□□□□ 0.95
ATG4C-205ENST00000443289 FZD9O00144 591 aa20.97■□□□□ 0.95
ATG4C-205ENST00000443289 TWISTNBQ3B726 338 aaPredicted RBP20.97■□□□□ 0.95
ATG4C-205ENST00000443289 STK31Q9BXU1 1019 aa20.97■□□□□ 0.95
ATG4C-205ENST00000443289 IQCA1LA6NCM1 817 aa20.96■□□□□ 0.95
ATG4C-205ENST00000443289 HSP90B1P14625 803 aaKnown RBP20.96■□□□□ 0.95
ATG4C-205ENST00000443289 GRAPQ13588 217 aa20.96■□□□□ 0.95
ATG4C-205ENST00000443289 SP8Q8IXZ3 490 aa20.96■□□□□ 0.95
ATG4C-205ENST00000443289 GRAPLQ8TC17 118 aaPredicted RBP20.96■□□□□ 0.95
ATG4C-205ENST00000443289 ZNF428Q96B54 188 aa20.96■□□□□ 0.95
ATG4C-205ENST00000443289 L3MBTL3Q96JM7 780 aaPredicted RBP20.96■□□□□ 0.95
ATG4C-205ENST00000443289 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
ATG4C-205ENST00000443289 TMC4Q7Z404 712 aa20.95■□□□□ 0.94
ATG4C-205ENST00000443289 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
ATG4C-205ENST00000443289 CCDC191Q8NCU4 936 aa20.95■□□□□ 0.94
ATG4C-205ENST00000443289 MYD88Q99836 296 aa20.95■□□□□ 0.94
ATG4C-205ENST00000443289 VPS33BQ9H267 617 aa20.95■□□□□ 0.94
ATG4C-205ENST00000443289 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
ATG4C-205ENST00000443289 LARGE2Q8N3Y3 721 aa20.94■□□□□ 0.94
ATG4C-205ENST00000443289 SUPT20HQ8NEM7 779 aa20.94■□□□□ 0.94
ATG4C-205ENST00000443289 METTL22Q9BUU2 404 aaPredicted RBP20.94■□□□□ 0.94
ATG4C-205ENST00000443289 ZNF541Q9H0D2 1346 aa20.94■□□□□ 0.94
ATG4C-205ENST00000443289 CEP350Q5VT06 3117 aa20.93■□□□□ 0.94
ATG4C-205ENST00000443289 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
ATG4C-205ENST00000443289 KSR2Q6VAB6 950 aa20.93■□□□□ 0.94
ATG4C-205ENST00000443289 EIF6P56537 245 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms