RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 ARFGEF1Q9Y6D6 1849 aa15.61■□□□□ 0.09
SLC48A1-202ENST00000442892 FLIIQ13045 1269 aa15.61■□□□□ 0.09
SLC48A1-202ENST00000442892 DALRD3Q5D0E6 543 aaKnown RBP15.61■□□□□ 0.09
SLC48A1-202ENST00000442892 RTL5Q5HYW3 569 aaPredicted RBP15.61■□□□□ 0.09
SLC48A1-202ENST00000442892 NLRP10Q86W26 655 aa15.61■□□□□ 0.09
SLC48A1-202ENST00000442892 TRMT112Q9UI30 125 aaKnown RBP15.61■□□□□ 0.09
SLC48A1-202ENST00000442892 PI4KAP2A4QPH2 592 aa15.6■□□□□ 0.09
SLC48A1-202ENST00000442892 GRIN3BO60391 1043 aa15.6■□□□□ 0.09
SLC48A1-202ENST00000442892 NTSR2O95665 410 aa15.6■□□□□ 0.09
SLC48A1-202ENST00000442892 PI4KAP1Q8N8J0 262 aa15.6■□□□□ 0.09
SLC48A1-202ENST00000442892 BCL2L13Q9BXK5 485 aa15.6■□□□□ 0.09
SLC48A1-202ENST00000442892 UTRNP46939 3433 aa15.6■□□□□ 0.09
SLC48A1-202ENST00000442892 KCNA3P22001 575 aa15.59■□□□□ 0.09
SLC48A1-202ENST00000442892 NEXNQ0ZGT2 675 aa15.59■□□□□ 0.09
SLC48A1-202ENST00000442892 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
SLC48A1-202ENST00000442892 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
SLC48A1-202ENST00000442892 LAMB2P55268 1798 aa15.59■□□□□ 0.09
SLC48A1-202ENST00000442892 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
SLC48A1-202ENST00000442892 ADCY9O60503 1353 aa15.58■□□□□ 0.08
SLC48A1-202ENST00000442892 HCLS1P14317 486 aaPredicted RBP15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 ARHGAP27Q6ZUM4 889 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 SYNE4Q8N205 404 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 ISCA1Q9BUE6 129 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 METTL22Q9BUU2 404 aaPredicted RBP15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 PDZRN3Q9UPQ7 1066 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 DDX60Q8IY21 1712 aaKnown RBP15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 SLX4Q8IY92 1834 aa15.57■□□□□ 0.08
SLC48A1-202ENST00000442892 F6X3S4 739 aa15.56■□□□□ 0.08
SLC48A1-202ENST00000442892 SRGNP10124 158 aa15.56■□□□□ 0.08
SLC48A1-202ENST00000442892 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
SLC48A1-202ENST00000442892 MASTLQ96GX5 879 aa15.56■□□□□ 0.08
SLC48A1-202ENST00000442892 SMC4Q9NTJ3 1288 aa15.56■□□□□ 0.08
SLC48A1-202ENST00000442892 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
SLC48A1-202ENST00000442892 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 NPR1P16066 1061 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 CWF19L2Q2TBE0 894 aaKnown RBP15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 STYK1Q6J9G0 422 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 SLC4A10Q6U841 1118 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 DNAAF4Q8WXU2 420 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 SSH1Q8WYL5 1049 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 NLRP3Q96P20 1036 aa15.55■□□□□ 0.08
SLC48A1-202ENST00000442892 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 C21orf2O43822 256 aa15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 YY1P25490 414 aa15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 TRMT2AQ8IZ69 625 aaKnown RBP15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 TAF1P21675 1872 aa15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 CCDC88AQ3V6T2 1871 aa15.54■□□□□ 0.08
SLC48A1-202ENST00000442892 CCDC191Q8NCU4 936 aa15.53■□□□□ 0.08
SLC48A1-202ENST00000442892 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
SLC48A1-202ENST00000442892 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
SLC48A1-202ENST00000442892 MYH3P11055 1940 aa15.53■□□□□ 0.08
SLC48A1-202ENST00000442892 IRS4O14654 1257 aaPredicted RBP15.52■□□□□ 0.08
SLC48A1-202ENST00000442892 IGKV5-2P06315 115 aa15.52■□□□□ 0.08
SLC48A1-202ENST00000442892 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
SLC48A1-202ENST00000442892 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
SLC48A1-202ENST00000442892 RASSF7Q02833 373 aa15.51■□□□□ 0.07
SLC48A1-202ENST00000442892 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
SLC48A1-202ENST00000442892 ZBTB38Q8NAP3 1195 aaPredicted RBP15.51■□□□□ 0.07
SLC48A1-202ENST00000442892 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
SLC48A1-202ENST00000442892 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
SLC48A1-202ENST00000442892 ALDH1B1P30837 517 aa15.5■□□□□ 0.07
SLC48A1-202ENST00000442892 ALDH1L2Q3SY69 923 aa15.5■□□□□ 0.07
SLC48A1-202ENST00000442892 CCDC85AQ96PX6 553 aaPredicted RBP15.5■□□□□ 0.07
SLC48A1-202ENST00000442892 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
SLC48A1-202ENST00000442892 SBF1O95248 1867 aa15.49■□□□□ 0.07
SLC48A1-202ENST00000442892 KLRG2A4D1S0 409 aaPredicted RBP15.49■□□□□ 0.07
SLC48A1-202ENST00000442892 CRY2Q49AN0 593 aa15.49■□□□□ 0.07
SLC48A1-202ENST00000442892 SLC10A5Q5PT55 438 aa15.49■□□□□ 0.07
SLC48A1-202ENST00000442892 DDX46Q7L014 1031 aaKnown RBP15.49■□□□□ 0.07
SLC48A1-202ENST00000442892 UBE3BQ7Z3V4 1068 aa15.49■□□□□ 0.07
SLC48A1-202ENST00000442892 FER1L6Q2WGJ9 1857 aa15.48■□□□□ 0.07
SLC48A1-202ENST00000442892 PPEF1O14829 653 aaPredicted RBP15.48■□□□□ 0.07
SLC48A1-202ENST00000442892 HSP90B1P14625 803 aaKnown RBP15.48■□□□□ 0.07
SLC48A1-202ENST00000442892 OLFM4Q6UX06 510 aa15.48■□□□□ 0.07
SLC48A1-202ENST00000442892 LINS1Q8NG48 757 aa15.48■□□□□ 0.07
SLC48A1-202ENST00000442892 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
SLC48A1-202ENST00000442892 ABCC4O15439 1325 aa15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 PTPRCP08575 1304 aa15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 RARSP54136 660 aaKnown RBP15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 GCKRQ14397 625 aa15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 SRCIN1Q9C0H9 1055 aa15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
SLC48A1-202ENST00000442892 PDE8AO60658 829 aa15.46■□□□□ 0.07
SLC48A1-202ENST00000442892 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
SLC48A1-202ENST00000442892 BEND3Q5T5X7 828 aa15.46■□□□□ 0.07
SLC48A1-202ENST00000442892 SOGA3Q5TF21 947 aa15.46■□□□□ 0.07
SLC48A1-202ENST00000442892 CRAMP1Q96RY5 1269 aa15.46■□□□□ 0.07
SLC48A1-202ENST00000442892 C9orf78Q9NZ63 289 aaPredicted RBP15.46■□□□□ 0.07
SLC48A1-202ENST00000442892 BCAR3O75815 825 aa15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 HOXA10P31260 410 aaPredicted RBP15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms