RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 MAP4K1Q92918 833 aa19.72■□□□□ 0.75
SEMA3B-207ENST00000441915 CCDC8Q9H0W5 538 aaPredicted RBP19.72■□□□□ 0.75
SEMA3B-207ENST00000441915 ME3Q16798 604 aa19.72■□□□□ 0.75
SEMA3B-207ENST00000441915 FAM227BQ96M60 508 aa19.72■□□□□ 0.75
SEMA3B-207ENST00000441915 DNM1Q05193 864 aaKnown RBP19.71■□□□□ 0.75
SEMA3B-207ENST00000441915 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
SEMA3B-207ENST00000441915 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
SEMA3B-207ENST00000441915 PDIA4P13667 645 aaKnown RBP19.71■□□□□ 0.75
SEMA3B-207ENST00000441915 RIC3Q7Z5B4 369 aa19.71■□□□□ 0.75
SEMA3B-207ENST00000441915 VPS37CA5D8V6 355 aaPredicted RBP19.7■□□□□ 0.74
SEMA3B-207ENST00000441915 HCLS1P14317 486 aaPredicted RBP19.7■□□□□ 0.74
SEMA3B-207ENST00000441915 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
SEMA3B-207ENST00000441915 USP25Q9UHP3 1055 aa19.7■□□□□ 0.74
SEMA3B-207ENST00000441915 RNF20Q5VTR2 975 aa19.7■□□□□ 0.74
SEMA3B-207ENST00000441915 DDX54Q8TDD1 881 aaKnown RBP19.7■□□□□ 0.74
SEMA3B-207ENST00000441915 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 NEXNQ0ZGT2 675 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 FSD1Q9BTV5 496 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 SIL1Q9H173 461 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 BOLA2Q9H3K6 86 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 SNRKQ9NRH2 765 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 TPCN1Q9ULQ1 816 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 SLIT3O75094 1523 aa19.69■□□□□ 0.74
SEMA3B-207ENST00000441915 ST3GAL1Q11201 340 aa19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 PDIA6Q15084 440 aa19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 NECAB1Q8N987 351 aa19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 SLC27A2O14975 620 aa19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 LARP1BQ659C4 914 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 TLR7Q9NYK1 1049 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-207ENST00000441915 IGKV5-2P06315 115 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 ANKRD1Q15327 319 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 ADCY5O95622 1261 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 ZNF790Q6PG37 636 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 BLOC1S2Q6QNY1 142 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 A0A0D9SFI3 127 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 DTNBO60941 627 aa19.67■□□□□ 0.74
SEMA3B-207ENST00000441915 SIPA1L3O60292 1781 aaPredicted RBP19.66■□□□□ 0.74
SEMA3B-207ENST00000441915 PDCP20941 246 aa19.66■□□□□ 0.74
SEMA3B-207ENST00000441915 GIMAP6Q6P9H5 292 aa19.66■□□□□ 0.74
SEMA3B-207ENST00000441915 UQCRHLA0A096LP55 91 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 NEURL1BA8MQ27 555 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 UQCRHP07919 91 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 MYL6BP14649 208 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 KRT85P78386 507 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 LMTK3Q96Q04 1460 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 SLC39A6Q13433 755 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 KLHDC4Q8TBB5 520 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 FUCA2Q9BTY2 467 aa19.65■□□□□ 0.74
SEMA3B-207ENST00000441915 KDM4AO75164 1064 aa19.64■□□□□ 0.73
SEMA3B-207ENST00000441915 GCKRQ14397 625 aa19.64■□□□□ 0.73
SEMA3B-207ENST00000441915 HMG20BQ9P0W2 317 aa19.64■□□□□ 0.73
SEMA3B-207ENST00000441915 CAMTA1Q9Y6Y1 1673 aa19.64■□□□□ 0.73
SEMA3B-207ENST00000441915 RAPGEF4Q8WZA2 1011 aa19.64■□□□□ 0.73
SEMA3B-207ENST00000441915 MED23Q9ULK4 1368 aa19.64■□□□□ 0.73
SEMA3B-207ENST00000441915 ERBB3P21860 1342 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 SLC52A2Q9HAB3 445 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 RPS6KB1P23443 525 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 SASS6Q6UVJ0 657 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 XAGE3Q8WTP9 111 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 MYD88Q99836 296 aa19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 ALDH8A1Q9H2A2 487 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 NPHP4O75161 1426 aaPredicted RBP19.63■□□□□ 0.73
SEMA3B-207ENST00000441915 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
SEMA3B-207ENST00000441915 METTL22Q9BUU2 404 aaPredicted RBP19.62■□□□□ 0.73
SEMA3B-207ENST00000441915 KRT28Q7Z3Y7 464 aa19.62■□□□□ 0.73
SEMA3B-207ENST00000441915 TCEANC2Q96MN5 208 aa19.62■□□□□ 0.73
SEMA3B-207ENST00000441915 CCDC192P0DO97 292 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 CDC37L1Q7L3B6 337 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 FERMT3Q86UX7 667 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 MPNDQ8N594 471 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 PLCB2Q00722 1185 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 TSGA10IPQ3SY00 556 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 DNTTIP2Q5QJE6 756 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 ZNF589Q86UQ0 364 aaPredicted RBP19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 PIBF1Q8WXW3 757 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 ZNF830Q96NB3 372 aaPredicted RBP19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 ELP1O95163 1332 aa19.61■□□□□ 0.73
SEMA3B-207ENST00000441915 COL9A3Q14050 684 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 EPHA10Q5JZY3 1008 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 TTC6Q86TZ1 520 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 NFATC2IPQ8NCF5 419 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 COPRSQ9NQ92 184 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 RBM10P98175 930 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 ANKRD13DQ6ZTN6 518 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 PRDM4Q9UKN5 801 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 MRC1P22897 1456 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 TAF5LO75529 589 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 TOB2Q14106 344 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 FAM13BQ9NYF5 915 aa19.6■□□□□ 0.73
SEMA3B-207ENST00000441915 JCADQ9P266 1359 aa19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 DYNC1I1O14576 645 aa19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 KRT32Q14532 448 aa19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 TTC12Q9H892 705 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms