RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 TMPOP42166 694 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 DHX37Q8IY37 1157 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 ZGPATQ8N5A5 531 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 CABP1Q9NZU7 370 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 CCDC141Q6ZP82 1450 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 PIP4K2BP78356 416 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 MSANTD4Q8NCY6 345 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 USP25Q9UHP3 1055 aa7.64□□□□□ -1.19
USP46-201ENST00000441222 SRRTQ9BXP5 876 aaKnown RBP7.64□□□□□ -1.19
USP46-201ENST00000441222 MYO1BO43795 1136 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 TBCAO75347 108 aaKnown RBP7.63□□□□□ -1.19
USP46-201ENST00000441222 GNAQP50148 359 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 IL1RAPL2Q9NP60 686 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 ODF2LQ9ULJ1 636 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 GOLGA8AA7E2F4 631 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 GSTO1P78417 241 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 IMPG2Q9BZV3 1241 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
USP46-201ENST00000441222 CEP83Q9Y592 693 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 IARSP41252 1262 aaKnown RBP7.63□□□□□ -1.19
USP46-201ENST00000441222 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 WDR78Q5VTH9 848 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 DUSP27Q5VZP5 1158 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 SLC12A5Q9H2X9 1139 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 ATP2A2P16615 1042 aaKnown RBP7.63□□□□□ -1.19
USP46-201ENST00000441222 KAT14Q9H8E8 782 aa7.63□□□□□ -1.19
USP46-201ENST00000441222 IBSPP21815 317 aaPredicted RBP7.63□□□□□ -1.19
USP46-201ENST00000441222 PUF60Q9UHX1 559 aaKnown RBP7.63□□□□□ -1.19
USP46-201ENST00000441222 GAS8O95995 478 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 KRT13P13646 458 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 ALDH3A1P30838 453 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 MNAT1P51948 309 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 MXRA7P84157 204 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 BOLA2Q9H3K6 86 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 SAMM50Q9Y512 469 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 AKNAQ7Z591 1439 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 GMNNO75496 209 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 ZBTB16Q05516 673 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 NAP1L3Q99457 506 aaPredicted RBP7.62□□□□□ -1.19
USP46-201ENST00000441222 TXNDC16Q9P2K2 825 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 NDC80O14777 642 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 SNX16P57768 344 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 TMC6Q7Z403 805 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 CCDC82Q8N4S0 544 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 RGS22Q8NE09 1264 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 SEPT6Q14141 434 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 TMEM67Q5HYA8 995 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 MFSD6Q6ZSS7 791 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
USP46-201ENST00000441222 ZNF165P49910 485 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 MPNDQ8N594 471 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 TMEM57Q8N5G2 664 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 KCNG4Q8TDN1 519 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 BICD1Q96G01 975 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 LRPPRCP42704 1394 aaKnown RBP7.62□□□□□ -1.19
USP46-201ENST00000441222 AKR1B10O60218 316 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 PRPF40BQ6NWY9 871 aaKnown RBP7.62□□□□□ -1.19
USP46-201ENST00000441222 STIM2Q9P246 746 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 DBF4Q9UBU7 674 aaPredicted RBP7.62□□□□□ -1.19
USP46-201ENST00000441222 EXOC6BQ9Y2D4 811 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
USP46-201ENST00000441222 ARID4AP29374 1257 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 GABPB2Q8TAK5 448 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 C16orf45Q96MC5 204 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 NUTM2BA6NNL0 878 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 NUTM2EB1AL46 878 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 NUTM2AQ8IVF1 878 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 N4BP3O15049 544 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 ZFYP08048 801 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 IDEP14735 1019 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 CNGA1P29973 690 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 APBB1IPQ7Z5R6 666 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 NCOA7Q8NI08 942 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 SPAG5Q96R06 1193 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 KRT23Q9C075 422 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 CTAGE9A4FU28 777 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 TSPY2A6NKD2 308 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 RBM25P49756 843 aaKnown RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 CHMP4BP1P59074 171 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 TRIM47Q96LD4 638 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 KRT83P78385 493 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 FERMT3Q86UX7 667 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 ARFGAP2Q8N6H7 521 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 SWAP70Q9UH65 585 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 TACC1O75410 805 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 METAP2P50579 478 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP46-201ENST00000441222 CBX1P83916 185 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 ERCC6LQ2NKX8 1250 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 CRNKL1Q9BZJ0 848 aaKnown RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 ARL1P40616 181 aaPredicted RBP7.61□□□□□ -1.19
USP46-201ENST00000441222 DNA2P51530 1060 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 UBASH3AP57075 661 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 KRT222Q8N1A0 295 aa7.61□□□□□ -1.19
USP46-201ENST00000441222 PSMA7O14818 248 aa7.6□□□□□ -1.19
USP46-201ENST00000441222 SMC1BQ8NDV3 1235 aa7.6□□□□□ -1.19
USP46-201ENST00000441222 PSMD1Q99460 953 aa7.6□□□□□ -1.19
USP46-201ENST00000441222 PHACTR2O75167 634 aa7.6□□□□□ -1.19
USP46-201ENST00000441222 SYKP43405 635 aa7.6□□□□□ -1.19
USP46-201ENST00000441222 GNG11P61952 73 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms