RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 RABL6Q3YEC7 729 aaPredicted RBP34.8■■■■□ 3.16
CGREF1-207ENST00000440612 RGS3P49796 1198 aa34.79■■■■□ 3.16
CGREF1-207ENST00000440612 ANKRD45Q5TZF3 282 aa34.79■■■■□ 3.16
CGREF1-207ENST00000440612 APBA3O96018 575 aa34.79■■■■□ 3.16
CGREF1-207ENST00000440612 ILDR1Q86SU0 546 aaPredicted RBP34.79■■■■□ 3.16
CGREF1-207ENST00000440612 RTCBQ9Y3I0 505 aaKnown RBP34.79■■■■□ 3.16
CGREF1-207ENST00000440612 PCCAP05165 728 aaPredicted RBP34.78■■■■□ 3.16
CGREF1-207ENST00000440612 FOXO4P98177 505 aa34.78■■■■□ 3.16
CGREF1-207ENST00000440612 RGL2O15211 777 aa34.77■■■■□ 3.16
CGREF1-207ENST00000440612 LNPKQ9C0E8 428 aa34.77■■■■□ 3.16
CGREF1-207ENST00000440612 BCL2L12Q9HB09 334 aa34.77■■■■□ 3.16
CGREF1-207ENST00000440612 EXOC6BQ9Y2D4 811 aa34.77■■■■□ 3.16
CGREF1-207ENST00000440612 SCN7AQ01118 1682 aa34.77■■■■□ 3.16
CGREF1-207ENST00000440612 RTL5Q5HYW3 569 aaPredicted RBP34.76■■■■□ 3.16
CGREF1-207ENST00000440612 ZBTB38Q8NAP3 1195 aaPredicted RBP34.76■■■■□ 3.16
CGREF1-207ENST00000440612 CLEC4GQ6UXB4 293 aa34.76■■■■□ 3.15
CGREF1-207ENST00000440612 NARFQ9UHQ1 456 aa34.76■■■■□ 3.15
CGREF1-207ENST00000440612 ARHGEF1Q92888 912 aaKnown RBP34.75■■■■□ 3.15
CGREF1-207ENST00000440612 FAM89AQ96GI7 184 aa34.74■■■■□ 3.15
CGREF1-207ENST00000440612 AK7Q96M32 723 aa34.73■■■■□ 3.15
CGREF1-207ENST00000440612 NOP58Q9Y2X3 529 aaKnown RBP34.73■■■■□ 3.15
CGREF1-207ENST00000440612 SYNE4Q8N205 404 aa34.73■■■■□ 3.15
CGREF1-207ENST00000440612 UBR3Q6ZT12 1888 aa34.72■■■■□ 3.15
CGREF1-207ENST00000440612 SRP68Q9UHB9 627 aaKnown RBP34.72■■■■□ 3.15
CGREF1-207ENST00000440612 CDHR2Q9BYE9 1310 aa34.71■■■■□ 3.15
CGREF1-207ENST00000440612 SUSD4Q5VX71 490 aa34.71■■■■□ 3.15
CGREF1-207ENST00000440612 PLA2G12BQ9BX93 195 aa34.71■■■■□ 3.15
CGREF1-207ENST00000440612 C4AP0C0L4 1744 aa34.71■■■■□ 3.15
CGREF1-207ENST00000440612 RFX5P48382 616 aaPredicted RBP34.7■■■■□ 3.15
CGREF1-207ENST00000440612 ZNF652Q9Y2D9 606 aa34.7■■■■□ 3.15
CGREF1-207ENST00000440612 USPL1Q5W0Q7 1092 aa34.7■■■■□ 3.14
CGREF1-207ENST00000440612 RGPD3A6NKT7 1758 aaPredicted RBP34.69■■■■□ 3.14
CGREF1-207ENST00000440612 RGPD4Q7Z3J3 1758 aa34.69■■■■□ 3.14
CGREF1-207ENST00000440612 SMARCA5O60264 1052 aaPredicted RBP34.69■■■■□ 3.14
CGREF1-207ENST00000440612 SURF6O75683 361 aaKnown RBP34.69■■■■□ 3.14
CGREF1-207ENST00000440612 LMBR1LQ6UX01 489 aa34.69■■■■□ 3.14
CGREF1-207ENST00000440612 PARP10Q53GL7 1025 aa34.68■■■■□ 3.14
CGREF1-207ENST00000440612 PA2G4Q9UQ80 394 aaKnown RBP34.68■■■■□ 3.14
CGREF1-207ENST00000440612 NIP7Q9Y221 180 aaKnown RBP eCLIP34.68■■■■□ 3.14
CGREF1-207ENST00000440612 APBB1O00213 710 aa34.67■■■■□ 3.14
CGREF1-207ENST00000440612 ADRA2BP18089 450 aa34.67■■■■□ 3.14
CGREF1-207ENST00000440612 TRAPPC3LQ5T215 181 aa34.67■■■■□ 3.14
CGREF1-207ENST00000440612 TRMT112Q9UI30 125 aaKnown RBP34.67■■■■□ 3.14
CGREF1-207ENST00000440612 USP42Q9H9J4 1324 aaKnown RBP34.67■■■■□ 3.14
CGREF1-207ENST00000440612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.65■■■■□ 3.14
CGREF1-207ENST00000440612 PHF14O94880 888 aa34.65■■■■□ 3.14
CGREF1-207ENST00000440612 C16orf71Q8IYS4 520 aaPredicted RBP34.65■■■■□ 3.14
CGREF1-207ENST00000440612 RAB11FIP3O75154 756 aa34.64■■■■□ 3.14
CGREF1-207ENST00000440612 NTSR2O95665 410 aa34.64■■■■□ 3.14
CGREF1-207ENST00000440612 TBC1D9BQ66K14 1250 aa34.64■■■■□ 3.14
CGREF1-207ENST00000440612 AKT1S1Q96B36 256 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 LRRCC1Q9C099 1032 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 COPRSQ9NQ92 184 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 ZPR1O75312 459 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 CSF1RP07333 972 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 SSFA2P28290 1259 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 PTPN12Q05209 780 aaKnown RBP34.63■■■■□ 3.13
CGREF1-207ENST00000440612 ZNF827Q17R98 1081 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 KLHDC4Q8TBB5 520 aa34.63■■■■□ 3.13
CGREF1-207ENST00000440612 UTP14AQ9BVJ6 771 aaKnown RBP34.63■■■■□ 3.13
CGREF1-207ENST00000440612 OTUD7AQ8TE49 926 aaPredicted RBP34.62■■■■□ 3.13
CGREF1-207ENST00000440612 IRS4O14654 1257 aaPredicted RBP34.61■■■■□ 3.13
CGREF1-207ENST00000440612 HMGB2P26583 209 aaKnown RBP34.61■■■■□ 3.13
CGREF1-207ENST00000440612 RFC4P35249 363 aa34.61■■■■□ 3.13
CGREF1-207ENST00000440612 RHPN1Q8TCX5 695 aa34.6■■■■□ 3.13
CGREF1-207ENST00000440612 CAMKK2Q96RR4 588 aa34.6■■■■□ 3.13
CGREF1-207ENST00000440612 SH3TC1Q8TE82 1336 aa34.6■■■■□ 3.13
CGREF1-207ENST00000440612 HSP90AB4PQ58FF6 505 aa34.6■■■■□ 3.13
CGREF1-207ENST00000440612 PLEKHM2Q8IWE5 1019 aa34.59■■■■□ 3.13
CGREF1-207ENST00000440612 SALL3Q9BXA9 1300 aa34.58■■■■□ 3.13
CGREF1-207ENST00000440612 COL24A1Q17RW2 1714 aa34.58■■■■□ 3.13
CGREF1-207ENST00000440612 FAM177BA6PVY3 158 aa34.57■■■■□ 3.13
CGREF1-207ENST00000440612 KIF1BPQ96EK5 621 aa34.57■■■■□ 3.13
CGREF1-207ENST00000440612 TTLL11Q8NHH1 800 aa34.57■■■■□ 3.12
CGREF1-207ENST00000440612 SASH1O94885 1247 aa34.56■■■■□ 3.12
CGREF1-207ENST00000440612 CTSWP56202 376 aa34.56■■■■□ 3.12
CGREF1-207ENST00000440612 PDE8AO60658 829 aa34.55■■■■□ 3.12
CGREF1-207ENST00000440612 TSHZ2Q9NRE2 1034 aa34.55■■■■□ 3.12
CGREF1-207ENST00000440612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.55■■■■□ 3.12
CGREF1-207ENST00000440612 DDX60Q8IY21 1712 aaKnown RBP34.55■■■■□ 3.12
CGREF1-207ENST00000440612 EN1Q05925 392 aaPredicted RBP34.54■■■■□ 3.12
CGREF1-207ENST00000440612 EZH2Q15910 746 aaKnown RBP34.54■■■■□ 3.12
CGREF1-207ENST00000440612 BICDL1Q6ZP65 573 aa34.54■■■■□ 3.12
CGREF1-207ENST00000440612 IL1RAPL2Q9NP60 686 aa34.54■■■■□ 3.12
CGREF1-207ENST00000440612 ZBTB47Q9UFB7 747 aaPredicted RBP34.54■■■■□ 3.12
CGREF1-207ENST00000440612 FAM161AQ3B820 660 aa34.54■■■■□ 3.12
CGREF1-207ENST00000440612 NUTM1Q86Y26 1132 aa34.54■■■■□ 3.12
CGREF1-207ENST00000440612 SIL1Q9H173 461 aa34.54■■■■□ 3.12
CGREF1-207ENST00000440612 CHMP3Q9Y3E7 222 aa34.54■■■■□ 3.12
CGREF1-207ENST00000440612 GYS1P13807 737 aa34.53■■■■□ 3.12
CGREF1-207ENST00000440612 HCLS1P14317 486 aaPredicted RBP34.53■■■■□ 3.12
CGREF1-207ENST00000440612 ERC1Q8IUD2 1116 aa34.52■■■■□ 3.12
CGREF1-207ENST00000440612 SETDB2Q96T68 719 aa34.52■■■■□ 3.12
CGREF1-207ENST00000440612 G3BP1Q13283 466 aaKnown RBP eCLIP34.51■■■■□ 3.12
CGREF1-207ENST00000440612 LAMB2P55268 1798 aa34.51■■■■□ 3.12
CGREF1-207ENST00000440612 TUBGCP6Q96RT7 1819 aa34.51■■■■□ 3.11
CGREF1-207ENST00000440612 OS9Q13438 667 aaPredicted RBP34.5■■■■□ 3.11
CGREF1-207ENST00000440612 GREM2Q9H772 168 aa34.5■■■■□ 3.11
CGREF1-207ENST00000440612 MYH3P11055 1940 aa34.5■■■■□ 3.11
CGREF1-207ENST00000440612 NFIXQ14938 502 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms