RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
SMC2-204ENST00000440179 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
SMC2-204ENST00000440179 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
SMC2-204ENST00000440179 TRAF5O00463 557 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 EPS15P42566 896 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 ECE1P42892 770 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 GRM1Q13255 1194 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 PAXIP1Q6ZW49 1069 aaPredicted RBP18.35■□□□□ 0.53
SMC2-204ENST00000440179 BEGAINQ9BUH8 593 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMC2-204ENST00000440179 GJA3Q9Y6H8 435 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 TRPM7Q96QT4 1865 aa18.35■□□□□ 0.53
SMC2-204ENST00000440179 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
SMC2-204ENST00000440179 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
SMC2-204ENST00000440179 AOC2O75106 756 aa18.34■□□□□ 0.53
SMC2-204ENST00000440179 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
SMC2-204ENST00000440179 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
SMC2-204ENST00000440179 JDP2Q8WYK2 163 aa18.34■□□□□ 0.53
SMC2-204ENST00000440179 TLL2Q9Y6L7 1015 aa18.34■□□□□ 0.53
SMC2-204ENST00000440179 ABCC12Q96J65 1359 aa18.33■□□□□ 0.53
SMC2-204ENST00000440179 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
SMC2-204ENST00000440179 RGL2O15211 777 aa18.33■□□□□ 0.52
SMC2-204ENST00000440179 ALDH1B1P30837 517 aa18.33■□□□□ 0.52
SMC2-204ENST00000440179 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
SMC2-204ENST00000440179 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
SMC2-204ENST00000440179 EIF6P56537 245 aaKnown RBP18.32■□□□□ 0.52
SMC2-204ENST00000440179 CRY2Q49AN0 593 aa18.32■□□□□ 0.52
SMC2-204ENST00000440179 MCOLN1Q9GZU1 580 aa18.32■□□□□ 0.52
SMC2-204ENST00000440179 MAP2K2P36507 400 aa18.31■□□□□ 0.52
SMC2-204ENST00000440179 HLFQ16534 295 aa18.31■□□□□ 0.52
SMC2-204ENST00000440179 CASP8AP2Q9UKL3 1982 aa18.31■□□□□ 0.52
SMC2-204ENST00000440179 U2SURPO15042 1029 aaKnown RBP18.3■□□□□ 0.52
SMC2-204ENST00000440179 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
SMC2-204ENST00000440179 USP50Q70EL3 339 aaPredicted RBP18.3■□□□□ 0.52
SMC2-204ENST00000440179 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
SMC2-204ENST00000440179 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
SMC2-204ENST00000440179 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
SMC2-204ENST00000440179 CC2D2BQ6DHV5 1058 aa18.29■□□□□ 0.52
SMC2-204ENST00000440179 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
SMC2-204ENST00000440179 LARGE2Q8N3Y3 721 aa18.28■□□□□ 0.52
SMC2-204ENST00000440179 CA12O43570 354 aa18.27■□□□□ 0.52
SMC2-204ENST00000440179 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.52
SMC2-204ENST00000440179 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
SMC2-204ENST00000440179 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
SMC2-204ENST00000440179 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
SMC2-204ENST00000440179 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
SMC2-204ENST00000440179 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
SMC2-204ENST00000440179 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
SMC2-204ENST00000440179 PRKAR2BP31323 418 aa18.25■□□□□ 0.51
SMC2-204ENST00000440179 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
SMC2-204ENST00000440179 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
SMC2-204ENST00000440179 GPRC5DQ9NZD1 345 aa18.25■□□□□ 0.51
SMC2-204ENST00000440179 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
SMC2-204ENST00000440179 HHIPL1Q96JK4 782 aa18.24■□□□□ 0.51
SMC2-204ENST00000440179 GLIS2Q9BZE0 524 aaPredicted RBP18.24■□□□□ 0.51
SMC2-204ENST00000440179 ADARB2Q9NS39 739 aaKnown RBP18.24■□□□□ 0.51
SMC2-204ENST00000440179 DGKZQ13574 1117 aa18.23■□□□□ 0.51
SMC2-204ENST00000440179 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
SMC2-204ENST00000440179 MCM10Q7L590 875 aa18.23■□□□□ 0.51
SMC2-204ENST00000440179 NIM1KQ8IY84 436 aa18.23■□□□□ 0.51
SMC2-204ENST00000440179 NYXQ9GZU5 481 aa18.23■□□□□ 0.51
SMC2-204ENST00000440179 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 CIAPIN1Q6FI81 312 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
SMC2-204ENST00000440179 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 ZIC5Q96T25 663 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 PGAP2Q9UHJ9 254 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
SMC2-204ENST00000440179 NUP98P52948 1817 aa18.21■□□□□ 0.51
SMC2-204ENST00000440179 IBTKQ9P2D0 1353 aaPredicted RBP18.21■□□□□ 0.51
SMC2-204ENST00000440179 PPEF1O14829 653 aaPredicted RBP18.21■□□□□ 0.51
SMC2-204ENST00000440179 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
SMC2-204ENST00000440179 MKRN4PQ13434 485 aaPredicted RBP18.21■□□□□ 0.51
SMC2-204ENST00000440179 AOC3Q16853 763 aa18.21■□□□□ 0.51
SMC2-204ENST00000440179 LAMB4A4D0S4 1761 aa18.2■□□□□ 0.5
SMC2-204ENST00000440179 ERVV-1B6SEH8 477 aa18.2■□□□□ 0.5
SMC2-204ENST00000440179 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
SMC2-204ENST00000440179 GMPSP49915 693 aaPredicted RBP18.2■□□□□ 0.5
SMC2-204ENST00000440179 CXCL9Q07325 125 aa18.2■□□□□ 0.5
SMC2-204ENST00000440179 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
SMC2-204ENST00000440179 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
SMC2-204ENST00000440179 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
SMC2-204ENST00000440179 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
SMC2-204ENST00000440179 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
SMC2-204ENST00000440179 MAP3K15Q6ZN16 1313 aa18.19■□□□□ 0.5
SMC2-204ENST00000440179 GPTP24298 496 aa18.18■□□□□ 0.5
SMC2-204ENST00000440179 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
SMC2-204ENST00000440179 RBM17Q96I25 401 aaKnown RBP18.18■□□□□ 0.5
SMC2-204ENST00000440179 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
SMC2-204ENST00000440179 NTSR2O95665 410 aa18.17■□□□□ 0.5
SMC2-204ENST00000440179 TRPM4Q8TD43 1214 aa18.17■□□□□ 0.5
SMC2-204ENST00000440179 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
SMC2-204ENST00000440179 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
SMC2-204ENST00000440179 NOGQ13253 232 aa18.16■□□□□ 0.5
SMC2-204ENST00000440179 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
SMC2-204ENST00000440179 ZC3H15Q8WU90 426 aaKnown RBP18.16■□□□□ 0.5
SMC2-204ENST00000440179 RTFDC1Q9BY42 306 aaPredicted RBP18.16■□□□□ 0.5
SMC2-204ENST00000440179 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
SMC2-204ENST00000440179 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms