RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 ERICH6BQ5W0A0 696 aa9.43□□□□□ -0.9
UBR3-205ENST00000439681 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
UBR3-205ENST00000439681 GNAI3P08754 354 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 BICDL1Q6ZP65 573 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 SYNE4Q8N205 404 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 KAZALD1Q96I82 304 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 PCDHB15Q9Y5E8 787 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
UBR3-205ENST00000439681 PCCAP05165 728 aaPredicted RBP9.41□□□□□ -0.9
UBR3-205ENST00000439681 AAMPQ13685 434 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 ZBTB38Q8NAP3 1195 aaPredicted RBP9.41□□□□□ -0.9
UBR3-205ENST00000439681 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 SETDB2Q96T68 719 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 CHMP4BQ9H444 224 aaKnown RBP9.41□□□□□ -0.9
UBR3-205ENST00000439681 C1orf115Q9H7X2 142 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 NTSR2O95665 410 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 UBTFL1P0CB47 393 aaPredicted RBP9.41□□□□□ -0.9
UBR3-205ENST00000439681 UBE3BQ7Z3V4 1068 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 SUCLG2Q96I99 432 aa9.41□□□□□ -0.9
UBR3-205ENST00000439681 UTP14AQ9BVJ6 771 aaKnown RBP9.41□□□□□ -0.9
UBR3-205ENST00000439681 TRMT112Q9UI30 125 aaKnown RBP9.41□□□□□ -0.9
UBR3-205ENST00000439681 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
UBR3-205ENST00000439681 GNAI2P04899 355 aa9.4□□□□□ -0.9
UBR3-205ENST00000439681 DDR1Q08345 913 aa9.4□□□□□ -0.9
UBR3-205ENST00000439681 R3HDM1Q15032 1099 aaKnown RBP9.4□□□□□ -0.9
UBR3-205ENST00000439681 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
UBR3-205ENST00000439681 EPHA10Q5JZY3 1008 aa9.4□□□□□ -0.9
UBR3-205ENST00000439681 PPP1R42Q7Z4L9 355 aa9.4□□□□□ -0.9
UBR3-205ENST00000439681 LRRFIP2Q9Y608 721 aaKnown RBP9.4□□□□□ -0.9
UBR3-205ENST00000439681 ARFGEF2Q9Y6D5 1785 aa9.4□□□□□ -0.9
UBR3-205ENST00000439681 MSL1Q68DK7 614 aa9.4□□□□□ -0.91
UBR3-205ENST00000439681 SIRT2Q8IXJ6 389 aa9.4□□□□□ -0.91
UBR3-205ENST00000439681 POLRMTO00411 1230 aaKnown RBP9.39□□□□□ -0.91
UBR3-205ENST00000439681 FOXO4P98177 505 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 SH3TC1Q8TE82 1336 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 CDHR2Q9BYE9 1310 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 SERPINB2P05120 415 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 SLC10A5Q5PT55 438 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 CEP85Q6P2H3 762 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
UBR3-205ENST00000439681 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 PLA2G12BQ9BX93 195 aa9.39□□□□□ -0.91
UBR3-205ENST00000439681 SCN7AQ01118 1682 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 C4AP0C0L4 1744 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
UBR3-205ENST00000439681 MMP10P09238 476 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 HCLS1P14317 486 aaPredicted RBP9.38□□□□□ -0.91
UBR3-205ENST00000439681 ATP8B2P98198 1209 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 NYXQ9GZU5 481 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 BICC1Q9H694 974 aaKnown RBP9.38□□□□□ -0.91
UBR3-205ENST00000439681 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 HDAC5Q9UQL6 1122 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 BCORQ6W2J9 1755 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 CARMIL3Q8ND23 1372 aa9.38□□□□□ -0.91
UBR3-205ENST00000439681 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
UBR3-205ENST00000439681 IGHDP01880 384 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 CSF1RP07333 972 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 RABL6Q3YEC7 729 aaPredicted RBP9.37□□□□□ -0.91
UBR3-205ENST00000439681 RPAP2Q8IXW5 612 aaPredicted RBP9.37□□□□□ -0.91
UBR3-205ENST00000439681 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 PNMA6EA0A0J9YXQ4 647 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 MTX1Q13505 466 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 C3orf67Q6ZVT6 689 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 TUBGCP6Q96RT7 1819 aa9.37□□□□□ -0.91
UBR3-205ENST00000439681 PDE8AO60658 829 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 ZBTB7AO95365 584 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
UBR3-205ENST00000439681 LMBR1LQ6UX01 489 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 ABCC12Q96J65 1359 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 NUP98P52948 1817 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 GTF2E1P29083 439 aaPredicted RBP9.36□□□□□ -0.91
UBR3-205ENST00000439681 POLA2Q14181 598 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 CNBD1Q8NA66 436 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 TTLL11Q8NHH1 800 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 SSH3Q8TE77 659 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
UBR3-205ENST00000439681 N4BP2Q86UW6 1770 aaPredicted RBP9.35□□□□□ -0.91
UBR3-205ENST00000439681 SOCS7O14512 581 aa9.35□□□□□ -0.91
UBR3-205ENST00000439681 RFX5P48382 616 aaPredicted RBP9.35□□□□□ -0.91
UBR3-205ENST00000439681 CTSWP56202 376 aa9.35□□□□□ -0.91
UBR3-205ENST00000439681 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
UBR3-205ENST00000439681 SRGAP3O43295 1099 aa9.34□□□□□ -0.91
UBR3-205ENST00000439681 SF3B3Q15393 1217 aaKnown RBP9.34□□□□□ -0.91
UBR3-205ENST00000439681 MTFR1LQ9H019 292 aa9.34□□□□□ -0.91
UBR3-205ENST00000439681 RWDD1Q9H446 243 aaPredicted RBP9.34□□□□□ -0.91
UBR3-205ENST00000439681 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
UBR3-205ENST00000439681 KLRG2A4D1S0 409 aaPredicted RBP9.34□□□□□ -0.91
UBR3-205ENST00000439681 HSP90B1P14625 803 aaKnown RBP9.34□□□□□ -0.91
UBR3-205ENST00000439681 CCDC136Q96JN2 1154 aa9.34□□□□□ -0.91
UBR3-205ENST00000439681 CCDC85AQ96PX6 553 aaPredicted RBP9.34□□□□□ -0.91
UBR3-205ENST00000439681 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms