RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 CD46P15529 392 aa9.99□□□□□ -0.81
HCG20-208ENST00000439406 NDUFV2P19404 249 aa9.99□□□□□ -0.81
HCG20-208ENST00000439406 PADI6Q6TGC4 694 aa9.99□□□□□ -0.81
HCG20-208ENST00000439406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.99□□□□□ -0.81
HCG20-208ENST00000439406 CGNL1Q0VF96 1302 aa9.99□□□□□ -0.81
HCG20-208ENST00000439406 NSD2O96028 1365 aa9.99□□□□□ -0.81
HCG20-208ENST00000439406 TGFB2P61812 414 aa9.98□□□□□ -0.81
HCG20-208ENST00000439406 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
HCG20-208ENST00000439406 HMX1Q9NP08 348 aaPredicted RBP9.98□□□□□ -0.81
HCG20-208ENST00000439406 KDM4AO75164 1064 aa9.97□□□□□ -0.81
HCG20-208ENST00000439406 RECKO95980 971 aa9.97□□□□□ -0.81
HCG20-208ENST00000439406 PRKAR2AP13861 404 aaKnown RBP9.97□□□□□ -0.81
HCG20-208ENST00000439406 ERCC5P28715 1186 aaPredicted RBP9.97□□□□□ -0.81
HCG20-208ENST00000439406 SERPINB4P48594 390 aa9.97□□□□□ -0.81
HCG20-208ENST00000439406 GIMAP6Q6P9H5 292 aa9.97□□□□□ -0.81
HCG20-208ENST00000439406 NOL8Q76FK4 1167 aaKnown RBP9.97□□□□□ -0.81
HCG20-208ENST00000439406 NME9Q86XW9 330 aa9.97□□□□□ -0.81
HCG20-208ENST00000439406 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
HCG20-208ENST00000439406 ZBTB3Q9H5J0 574 aa9.97□□□□□ -0.81
HCG20-208ENST00000439406 G3V3G9 751 aa9.96□□□□□ -0.82
HCG20-208ENST00000439406 DPH6Q7L8W6 267 aa9.96□□□□□ -0.82
HCG20-208ENST00000439406 HDGFL2Q7Z4V5 671 aaPredicted RBP9.96□□□□□ -0.82
HCG20-208ENST00000439406 NSD3Q9BZ95 1437 aa9.96□□□□□ -0.82
HCG20-208ENST00000439406 ARHGAP27Q6ZUM4 889 aa9.95□□□□□ -0.82
HCG20-208ENST00000439406 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
HCG20-208ENST00000439406 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
HCG20-208ENST00000439406 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
HCG20-208ENST00000439406 LTV1Q96GA3 475 aaPredicted RBP9.95□□□□□ -0.82
HCG20-208ENST00000439406 NMRK2Q9NPI5 230 aa9.95□□□□□ -0.82
HCG20-208ENST00000439406 LTN1O94822 1766 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 SBNO2Q9Y2G9 1366 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 KDM2BQ8NHM5 1336 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
HCG20-208ENST00000439406 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 TSNAXIP1Q2TAA8 658 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 ERICH6BQ5W0A0 696 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
HCG20-208ENST00000439406 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
HCG20-208ENST00000439406 WDR90Q96KV7 1748 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 USP54Q70EL1 1684 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 AMPHP49418 695 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
HCG20-208ENST00000439406 MPRIPQ6WCQ1 1025 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 NOP9Q86U38 636 aaKnown RBP9.93□□□□□ -0.82
HCG20-208ENST00000439406 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 TMEM121BQ9BXQ6 578 aaPredicted RBP9.93□□□□□ -0.82
HCG20-208ENST00000439406 TRPC6Q9Y210 931 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 BCS1LQ9Y276 419 aa9.93□□□□□ -0.82
HCG20-208ENST00000439406 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
HCG20-208ENST00000439406 CICQ96RK0 1608 aaPredicted RBP9.93□□□□□ -0.82
HCG20-208ENST00000439406 PALLDQ8WX93 1383 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 HOXC9P31274 260 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 HTRA3P83110 453 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 TYW1BQ6NUM6 668 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 NLGN1Q8N2Q7 840 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 SMC1BQ8NDV3 1235 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 HELBQ8NG08 1087 aaPredicted RBP9.92□□□□□ -0.82
HCG20-208ENST00000439406 PSMD1Q99460 953 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
HCG20-208ENST00000439406 EDC4Q6P2E9 1401 aaKnown RBP9.91□□□□□ -0.82
HCG20-208ENST00000439406 PLEKHG2Q9H7P9 1386 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 DOT1LQ8TEK3 1739 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 C5P01031 1676 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 A0A0G2JLW4 131 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 HAX1O00165 279 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 MARCH6O60337 910 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 SLC34A2O95436 690 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
HCG20-208ENST00000439406 NBPF6Q5VWK0 638 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 FBXO33Q7Z6M2 555 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 CLP1Q92989 425 aaKnown RBP9.91□□□□□ -0.82
HCG20-208ENST00000439406 NBPF4Q96M43 638 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 SLC12A5Q9H2X9 1139 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
HCG20-208ENST00000439406 PCNTO95613 3336 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 MMP10P09238 476 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 C7P10643 843 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 COG3Q96JB2 828 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
HCG20-208ENST00000439406 PCDHGA10Q9Y5H3 936 aa9.9□□□□□ -0.82
HCG20-208ENST00000439406 C10orf71Q711Q0 1435 aa9.9□□□□□ -0.83
HCG20-208ENST00000439406 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 LOC102724428A0A0B4J2F2 783 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 DDX11L8A8MPP1 907 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 ATP2B4P23634 1241 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 TIE1P35590 1138 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 SIK1P57059 783 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 TMF1P82094 1093 aa9.89□□□□□ -0.83
HCG20-208ENST00000439406 TRAPPC3LQ5T215 181 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms