RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
TSC2-206ENST00000439117 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
TSC2-206ENST00000439117 CCDC69A6NI79 296 aa17.33■□□□□ 0.37
TSC2-206ENST00000439117 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.37
TSC2-206ENST00000439117 FLT4P35916 1363 aa17.33■□□□□ 0.37
TSC2-206ENST00000439117 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
TSC2-206ENST00000439117 ATP2B2Q01814 1243 aa17.33■□□□□ 0.36
TSC2-206ENST00000439117 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
TSC2-206ENST00000439117 AIDAQ96BJ3 306 aa17.33■□□□□ 0.36
TSC2-206ENST00000439117 RBM5P52756 815 aaKnown RBP eCLIP17.32■□□□□ 0.363e-6■□□□□ 9.3
TSC2-206ENST00000439117 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
TSC2-206ENST00000439117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■■■■ 103.5
TSC2-206ENST00000439117 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
TSC2-206ENST00000439117 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
TSC2-206ENST00000439117 ABCC1P33527 1531 aa17.32■□□□□ 0.36
TSC2-206ENST00000439117 SLU7O95391 586 aaKnown RBP17.32■□□□□ 0.36
TSC2-206ENST00000439117 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
TSC2-206ENST00000439117 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
TSC2-206ENST00000439117 GPTP24298 496 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 WASF1Q92558 559 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 RASSF4Q9H2L5 321 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 KRT18P05783 430 aaKnown RBP17.31■□□□□ 0.36
TSC2-206ENST00000439117 TMC6Q7Z403 805 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 UBAC1Q9BSL1 405 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
TSC2-206ENST00000439117 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
TSC2-206ENST00000439117 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 A0A1W2PP64 1363 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 GBP2P32456 591 aaPredicted RBP17.3■□□□□ 0.36
TSC2-206ENST00000439117 TRPM2O94759 1503 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 STX6O43752 255 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 NUP133Q8WUM0 1156 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 SNX21Q969T3 373 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 NAA15Q9BXJ9 866 aaKnown RBP17.3■□□□□ 0.36
TSC2-206ENST00000439117 CCDC8Q9H0W5 538 aaPredicted RBP17.3■□□□□ 0.36
TSC2-206ENST00000439117 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
TSC2-206ENST00000439117 SPECC1LQ69YQ0 1117 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
TSC2-206ENST00000439117 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
TSC2-206ENST00000439117 GNG11P61952 73 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 TTC31Q49AM3 519 aaPredicted RBP17.29■□□□□ 0.36
TSC2-206ENST00000439117 NEO1Q92859 1461 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 ANXA1P04083 346 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 IFFO1Q0D2I5 559 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 ATP5J2-PTCD1G3V325 749 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 GCP02774 474 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 FAM200AQ8TCP9 573 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
TSC2-206ENST00000439117 RRAGDQ9NQL2 400 aaPredicted RBP17.29■□□□□ 0.36
TSC2-206ENST00000439117 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
TSC2-206ENST00000439117 UBE3BQ7Z3V4 1068 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 HSPA4P34932 840 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 TUBB4BP68371 445 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 SKILP12757 684 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
TSC2-206ENST00000439117 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
TSC2-206ENST00000439117 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
TSC2-206ENST00000439117 CCDC186Q7Z3E2 898 aa17.27■□□□□ 0.36
TSC2-206ENST00000439117 ZSCAN29Q8IWY8 852 aaPredicted RBP17.27■□□□□ 0.36
TSC2-206ENST00000439117 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
TSC2-206ENST00000439117 YEATS4O95619 227 aa17.27■□□□□ 0.36
TSC2-206ENST00000439117 MYZAPP0CAP1 466 aa17.27■□□□□ 0.36
TSC2-206ENST00000439117 CAPN2P17655 700 aa17.27■□□□□ 0.36
TSC2-206ENST00000439117 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.36
TSC2-206ENST00000439117 SLC5A1P13866 664 aa17.27■□□□□ 0.36
TSC2-206ENST00000439117 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.36
TSC2-206ENST00000439117 SPECC1Q5M775 1068 aa17.27■□□□□ 0.35
TSC2-206ENST00000439117 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
TSC2-206ENST00000439117 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
TSC2-206ENST00000439117 CCDC12Q8WUD4 166 aaPredicted RBP17.26■□□□□ 0.35
TSC2-206ENST00000439117 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
TSC2-206ENST00000439117 V9GYY5 206 aaPredicted RBP17.26■□□□□ 0.35
TSC2-206ENST00000439117 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
TSC2-206ENST00000439117 UHRF1BP1Q6BDS2 1440 aa17.26■□□□□ 0.35
TSC2-206ENST00000439117 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
TSC2-206ENST00000439117 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
TSC2-206ENST00000439117 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
TSC2-206ENST00000439117 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
TSC2-206ENST00000439117 PIK3C2GO75747 1445 aa17.26■□□□□ 0.35
TSC2-206ENST00000439117 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
TSC2-206ENST00000439117 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 ECHDC1Q9NTX5 307 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 EBAG9O00559 213 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 CCDC113Q9H0I3 377 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 FKBP15Q5T1M5 1219 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
TSC2-206ENST00000439117 EYA1Q99502 592 aa17.25■□□□□ 0.35
TSC2-206ENST00000439117 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms