RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 PPP4R2Q9NY27 417 aa9.91□□□□□ -0.82
HMGB2-202ENST00000438704 NHSL1Q5SYE7 1610 aa9.9□□□□□ -0.82
HMGB2-202ENST00000438704 AXIN1O15169 862 aa9.9□□□□□ -0.82
HMGB2-202ENST00000438704 MDM2Q00987 491 aaPredicted RBP9.9□□□□□ -0.82
HMGB2-202ENST00000438704 NUTM2GQ5VZR2 741 aa9.9□□□□□ -0.82
HMGB2-202ENST00000438704 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
HMGB2-202ENST00000438704 IFT57Q9NWB7 429 aa9.9□□□□□ -0.82
HMGB2-202ENST00000438704 LMO7Q8WWI1 1683 aa9.9□□□□□ -0.83
HMGB2-202ENST00000438704 FANCIQ9NVI1 1328 aa9.89□□□□□ -0.83
HMGB2-202ENST00000438704 COL18A1P39060 1754 aa9.89□□□□□ -0.83
HMGB2-202ENST00000438704 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
HMGB2-202ENST00000438704 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
HMGB2-202ENST00000438704 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.89□□□□□ -0.83
HMGB2-202ENST00000438704 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
HMGB2-202ENST00000438704 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
HMGB2-202ENST00000438704 TTC24A2A3L6 582 aaPredicted RBP9.88□□□□□ -0.83
HMGB2-202ENST00000438704 HOXA2O43364 376 aa9.88□□□□□ -0.83
HMGB2-202ENST00000438704 CLCN1P35523 988 aa9.88□□□□□ -0.83
HMGB2-202ENST00000438704 GNAI1P63096 354 aa9.88□□□□□ -0.83
HMGB2-202ENST00000438704 XPCQ01831 940 aaPredicted RBP9.88□□□□□ -0.83
HMGB2-202ENST00000438704 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
HMGB2-202ENST00000438704 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
HMGB2-202ENST00000438704 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
HMGB2-202ENST00000438704 AHDC1Q5TGY3 1603 aaPredicted RBP9.88□□□□□ -0.83
HMGB2-202ENST00000438704 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
HMGB2-202ENST00000438704 PDE3AQ14432 1141 aa9.87□□□□□ -0.83
HMGB2-202ENST00000438704 SNIP1Q8TAD8 396 aaKnown RBP9.87□□□□□ -0.83
HMGB2-202ENST00000438704 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
HMGB2-202ENST00000438704 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
HMGB2-202ENST00000438704 CRB1P82279 1406 aa9.86□□□□□ -0.83
HMGB2-202ENST00000438704 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 OVOS2A0A0G2JMS6 1433 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 CHL1O00533 1208 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 AAMPQ13685 434 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 MTHFSDQ2M296 383 aaKnown RBP9.85□□□□□ -0.83
HMGB2-202ENST00000438704 ALDH1L2Q3SY69 923 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 NBPF6Q5VWK0 638 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 NBPF4Q96M43 638 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
HMGB2-202ENST00000438704 KIAA0232Q92628 1395 aa9.85□□□□□ -0.83
HMGB2-202ENST00000438704 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
HMGB2-202ENST00000438704 ANKRD24Q8TF21 1146 aa9.84□□□□□ -0.83
HMGB2-202ENST00000438704 DDX17Q92841 729 aaKnown RBP9.84□□□□□ -0.83
HMGB2-202ENST00000438704 CEMIPQ8WUJ3 1361 aa9.84□□□□□ -0.83
HMGB2-202ENST00000438704 SOS1Q07889 1333 aaPredicted RBP9.83□□□□□ -0.84
HMGB2-202ENST00000438704 ABCA3Q99758 1704 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 SMPD1P17405 629 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 WNT7BP56706 349 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 EXOSC9Q06265 439 aaKnown RBP9.83□□□□□ -0.84
HMGB2-202ENST00000438704 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 HLA-CQ95604 372 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 MRGPRX2Q96LB1 330 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 DACH1Q9UI36 760 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 MAP3K5Q99683 1374 aa9.83□□□□□ -0.84
HMGB2-202ENST00000438704 COL22A1Q8NFW1 1626 aaPredicted RBP9.82□□□□□ -0.84
HMGB2-202ENST00000438704 GNAT3A8MTJ3 354 aa9.82□□□□□ -0.84
HMGB2-202ENST00000438704 BCAR3O75815 825 aa9.82□□□□□ -0.84
HMGB2-202ENST00000438704 JUNDP17535 347 aa9.82□□□□□ -0.84
HMGB2-202ENST00000438704 IRX6P78412 446 aaPredicted RBP9.82□□□□□ -0.84
HMGB2-202ENST00000438704 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
HMGB2-202ENST00000438704 TSR2Q969E8 191 aaKnown RBP9.82□□□□□ -0.84
HMGB2-202ENST00000438704 MBIPQ9NS73 344 aa9.82□□□□□ -0.84
HMGB2-202ENST00000438704 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
HMGB2-202ENST00000438704 ADAMTS7Q9UKP4 1686 aa9.82□□□□□ -0.84
HMGB2-202ENST00000438704 VAMP4O75379 141 aa9.81□□□□□ -0.84
HMGB2-202ENST00000438704 MS4A1P11836 297 aa9.81□□□□□ -0.84
HMGB2-202ENST00000438704 PLEKHO1Q53GL0 409 aaPredicted RBP9.81□□□□□ -0.84
HMGB2-202ENST00000438704 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
HMGB2-202ENST00000438704 RTF1Q92541 710 aaKnown RBP9.81□□□□□ -0.84
HMGB2-202ENST00000438704 ARHGAP45Q92619 1136 aa9.81□□□□□ -0.84
HMGB2-202ENST00000438704 LRRC59Q96AG4 307 aaKnown RBP9.81□□□□□ -0.84
HMGB2-202ENST00000438704 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
HMGB2-202ENST00000438704 FAM83GA6ND36 823 aa9.8□□□□□ -0.84
HMGB2-202ENST00000438704 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
HMGB2-202ENST00000438704 AKAP4Q5JQC9 854 aa9.8□□□□□ -0.84
HMGB2-202ENST00000438704 EXOC6Q8TAG9 804 aa9.8□□□□□ -0.84
HMGB2-202ENST00000438704 LTV1Q96GA3 475 aaPredicted RBP9.8□□□□□ -0.84
HMGB2-202ENST00000438704 THUMPD2Q9BTF0 503 aaKnown RBP9.8□□□□□ -0.84
HMGB2-202ENST00000438704 KIF16BQ96L93 1317 aa9.8□□□□□ -0.84
HMGB2-202ENST00000438704 RGPD2P0DJD1 1756 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 RGPD5Q99666 1765 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 PLIN1O60240 522 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 CCDC24Q8N4L8 307 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
HMGB2-202ENST00000438704 IL17REQ8NFR9 667 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 SSH1Q8WYL5 1049 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 WDR17Q8IZU2 1322 aa9.79□□□□□ -0.84
HMGB2-202ENST00000438704 IPO8O15397 1037 aaKnown RBP9.78□□□□□ -0.84
HMGB2-202ENST00000438704 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
HMGB2-202ENST00000438704 C20orf194Q5TEA3 1177 aa9.78□□□□□ -0.84
HMGB2-202ENST00000438704 ZKSCAN2Q63HK3 967 aa9.78□□□□□ -0.84
HMGB2-202ENST00000438704 MCM10Q7L590 875 aa9.78□□□□□ -0.84
HMGB2-202ENST00000438704 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
HMGB2-202ENST00000438704 CRBNQ96SW2 442 aa9.78□□□□□ -0.84
HMGB2-202ENST00000438704 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
HMGB2-202ENST00000438704 PKD1L3Q7Z443 1732 aa9.77□□□□□ -0.85
HMGB2-202ENST00000438704 J3QL48 77 aa9.77□□□□□ -0.85
HMGB2-202ENST00000438704 SKOR1P84550 965 aa9.77□□□□□ -0.85
HMGB2-202ENST00000438704 DCTN1Q14203 1278 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms