RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CHMLP26374 656 aa16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 ANO2Q9NQ90 1003 aa16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 A0A0G2JS52 829 aa16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
PTCHD3-201ENST00000438700 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
PTCHD3-201ENST00000438700 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
PTCHD3-201ENST00000438700 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
PTCHD3-201ENST00000438700 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
PTCHD3-201ENST00000438700 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
PTCHD3-201ENST00000438700 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
PTCHD3-201ENST00000438700 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 JARID2Q92833 1246 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 STARD3NLO95772 234 aa16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 IL25Q9H293 177 aa16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
PTCHD3-201ENST00000438700 SPATA31A6Q5VVP1 1343 aa16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 NEK4P51957 841 aa16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 PKP1Q13835 747 aa16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 VPS72Q15906 364 aa16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 PA2G4Q9UQ80 394 aaKnown RBP16.85■□□□□ 0.29
PTCHD3-201ENST00000438700 TJP1Q07157 1748 aa16.84■□□□□ 0.29
PTCHD3-201ENST00000438700 A0A087WZG4 1122 aa16.84■□□□□ 0.29
PTCHD3-201ENST00000438700 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
PTCHD3-201ENST00000438700 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
PTCHD3-201ENST00000438700 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
PTCHD3-201ENST00000438700 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.28
PTCHD3-201ENST00000438700 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.28
PTCHD3-201ENST00000438700 NOL8Q76FK4 1167 aaKnown RBP16.83■□□□□ 0.28
PTCHD3-201ENST00000438700 AOX1Q06278 1338 aa16.82■□□□□ 0.28
PTCHD3-201ENST00000438700 MCCP23508 829 aa16.81■□□□□ 0.28
PTCHD3-201ENST00000438700 CWC25Q9NXE8 425 aaPredicted RBP16.81■□□□□ 0.28
PTCHD3-201ENST00000438700 USP21Q9UK80 565 aa16.81■□□□□ 0.28
PTCHD3-201ENST00000438700 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
PTCHD3-201ENST00000438700 HSPA1LP34931 641 aa16.81■□□□□ 0.28
PTCHD3-201ENST00000438700 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
PTCHD3-201ENST00000438700 CASP7P55210 303 aa16.8■□□□□ 0.28
PTCHD3-201ENST00000438700 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
PTCHD3-201ENST00000438700 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
PTCHD3-201ENST00000438700 PKNOX2Q96KN3 472 aa16.8■□□□□ 0.28
PTCHD3-201ENST00000438700 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
PTCHD3-201ENST00000438700 COL15A1P39059 1388 aa16.8■□□□□ 0.28
PTCHD3-201ENST00000438700 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
PTCHD3-201ENST00000438700 GOLGA6L22H0YM25 854 aa16.79■□□□□ 0.28
PTCHD3-201ENST00000438700 NUCB2P80303 420 aa16.79■□□□□ 0.28
PTCHD3-201ENST00000438700 KLHDC4Q8TBB5 520 aa16.79■□□□□ 0.28
PTCHD3-201ENST00000438700 TMX3Q96JJ7 454 aa16.79■□□□□ 0.28
PTCHD3-201ENST00000438700 H7C1W4 665 aa16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 CCDC191Q8NCU4 936 aa16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 SIL1Q9H173 461 aa16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 KCNQ2O43526 872 aa16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 MEX3CQ5U5Q3 659 aaKnown RBP16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 MCTP1Q6DN14 999 aa16.78■□□□□ 0.28
PTCHD3-201ENST00000438700 TCIRG1Q13488 830 aa16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 RRP9O43818 475 aaKnown RBP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 CYP2E1P05181 493 aaPredicted RBP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 ISCA1Q9BUE6 129 aa16.77■□□□□ 0.28
PTCHD3-201ENST00000438700 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.27
PTCHD3-201ENST00000438700 SKOR2Q2VWA4 1001 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 PALLDQ8WX93 1383 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 SASH1O94885 1247 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 SIK1P57059 783 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 ANAPC15P60006 121 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 CHAMP1Q96JM3 812 aa16.76■□□□□ 0.27
PTCHD3-201ENST00000438700 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 FOXO4P98177 505 aa16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 SGSM2O43147 1006 aa16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 ZDHHC9Q9Y397 364 aa16.75■□□□□ 0.27
PTCHD3-201ENST00000438700 PTMSP20962 102 aa16.74■□□□□ 0.27
PTCHD3-201ENST00000438700 HLFQ16534 295 aa16.74■□□□□ 0.27
PTCHD3-201ENST00000438700 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
PTCHD3-201ENST00000438700 FBXO41Q8TF61 875 aa16.74■□□□□ 0.27
PTCHD3-201ENST00000438700 GLRX3O76003 335 aaKnown RBP16.74■□□□□ 0.27
PTCHD3-201ENST00000438700 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
PTCHD3-201ENST00000438700 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms