RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 DNAJC25Q9H1X3 360 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 SEPT11Q9NVA2 429 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 KDM5BQ9UGL1 1544 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 FOXO3O43524 673 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 MICU3Q86XE3 530 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 NCOA7Q8NI08 942 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 AK2P54819 239 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 TYRO3Q06418 890 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 CHPF2Q9P2E5 772 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 SYKP43405 635 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 USP5P45974 858 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 UBASH3AP57075 661 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 ZBTB3Q9H5J0 574 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 FANCAO15360 1455 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-211ENST00000438547 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 CHMLP26374 656 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 KANK3Q6NY19 840 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 KCNG4Q8TDN1 519 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 JARID2Q92833 1246 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 MKNK2Q9HBH9 465 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 ATP10BO94823 1461 aa12.9□□□□□ -0.34
SEMA4D-211ENST00000438547 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 ALDH1L1O75891 902 aa12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 NLRP5P59047 1200 aa12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 SEPT7Q16181 437 aaKnown RBP12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 KRT24Q2M2I5 525 aa12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.35
SEMA4D-211ENST00000438547 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 RBSNQ9H1K0 784 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 CCDC194A0A1B0GVG4 234 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 SLC5A1P13866 664 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 Q6ZUG5 572 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 CWC25Q9NXE8 425 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 ENOX2Q16206 610 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 CATIPQ7Z7H3 387 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 ZNF287Q9HBT7 754 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
SEMA4D-211ENST00000438547 AOPEPQ8N6M6 819 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 SLC26A6Q9BXS9 759 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 COL17A1Q9UMD9 1497 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 SEC63Q9UGP8 760 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 GRM8O00222 908 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 MCMDC2Q4G0Z9 681 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 TSG101Q99816 390 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 PLCD4Q9BRC7 762 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 SYT1P21579 422 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 LMAN1P49257 510 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
SEMA4D-211ENST00000438547 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 PTGS1P23219 599 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 MTIF2P46199 727 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 N4BP3O15049 544 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 ZNF76P36508 570 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 DNA2P51530 1060 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 KSR2Q6VAB6 950 aa12.87□□□□□ -0.35
SEMA4D-211ENST00000438547 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms