RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 NOM1Q5C9Z4 860 aaKnown RBP15.82■□□□□ 0.12
RTN4-211ENST00000438462 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
RTN4-211ENST00000438462 PSMD1Q99460 953 aa15.82■□□□□ 0.12
RTN4-211ENST00000438462 KIF24Q5T7B8 1368 aa15.82■□□□□ 0.12
RTN4-211ENST00000438462 FKTNO75072 461 aa15.81■□□□□ 0.12
RTN4-211ENST00000438462 NPR1P16066 1061 aa15.81■□□□□ 0.12
RTN4-211ENST00000438462 TRPM4Q8TD43 1214 aa15.81■□□□□ 0.12
RTN4-211ENST00000438462 HSP90AB1P08238 724 aaKnown RBP15.8■□□□□ 0.12
RTN4-211ENST00000438462 LARGE2Q8N3Y3 721 aa15.8■□□□□ 0.12
RTN4-211ENST00000438462 FAM122AQ96E09 287 aa15.8■□□□□ 0.12
RTN4-211ENST00000438462 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
RTN4-211ENST00000438462 MRC1P22897 1456 aa15.79■□□□□ 0.12
RTN4-211ENST00000438462 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
RTN4-211ENST00000438462 GMPSP49915 693 aaPredicted RBP15.78■□□□□ 0.12
RTN4-211ENST00000438462 CANXP27824 592 aaKnown RBP15.77■□□□□ 0.12
RTN4-211ENST00000438462 OTOP1Q7RTM1 612 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 NIM1KQ8IY84 436 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 DEFB123Q8N688 67 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 NFATC2IPQ8NCF5 419 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 ARMC5Q96C12 935 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 EYA1Q99502 592 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
RTN4-211ENST00000438462 KIF20BQ96Q89 1820 aa15.77■□□□□ 0.11
RTN4-211ENST00000438462 Q7L0L9 218 aa15.76■□□□□ 0.11
RTN4-211ENST00000438462 TMEM106CQ9BVX2 250 aa15.76■□□□□ 0.11
RTN4-211ENST00000438462 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
RTN4-211ENST00000438462 ADM5C9JUS6 153 aa15.75■□□□□ 0.11
RTN4-211ENST00000438462 ANKRD13DQ6ZTN6 518 aa15.75■□□□□ 0.11
RTN4-211ENST00000438462 KRT26Q7Z3Y9 468 aa15.75■□□□□ 0.11
RTN4-211ENST00000438462 EMILIN1Q9Y6C2 1016 aa15.75■□□□□ 0.11
RTN4-211ENST00000438462 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
RTN4-211ENST00000438462 SETDB2Q96T68 719 aa15.74■□□□□ 0.11
RTN4-211ENST00000438462 R3HDMLQ9H3Y0 253 aa15.74■□□□□ 0.11
RTN4-211ENST00000438462 POLR2AP24928 1970 aaKnown RBP15.74■□□□□ 0.11
RTN4-211ENST00000438462 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
RTN4-211ENST00000438462 CDHR2Q9BYE9 1310 aa15.73■□□□□ 0.11
RTN4-211ENST00000438462 SHTN1A0MZ66 631 aa15.73■□□□□ 0.11
RTN4-211ENST00000438462 DPF3Q92784 378 aa15.73■□□□□ 0.11
RTN4-211ENST00000438462 ROCK2O75116 1388 aaKnown RBP15.73■□□□□ 0.11
RTN4-211ENST00000438462 A0A087WZG4 1122 aa15.72■□□□□ 0.11
RTN4-211ENST00000438462 PTPN22Q9Y2R2 807 aa15.72■□□□□ 0.11
RTN4-211ENST00000438462 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
RTN4-211ENST00000438462 CXCL9Q07325 125 aa15.71■□□□□ 0.11
RTN4-211ENST00000438462 ZNF530Q6P9A1 599 aaPredicted RBP15.71■□□□□ 0.11
RTN4-211ENST00000438462 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
RTN4-211ENST00000438462 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
RTN4-211ENST00000438462 ZNF609O15014 1411 aa15.7■□□□□ 0.1
RTN4-211ENST00000438462 ST20-MTHFSA0A0A6YYL1 179 aa15.7■□□□□ 0.1
RTN4-211ENST00000438462 FYB1O15117 783 aa15.7■□□□□ 0.1
RTN4-211ENST00000438462 MTHFSP49914 203 aa15.7■□□□□ 0.1
RTN4-211ENST00000438462 SNX27Q96L92 541 aa15.7■□□□□ 0.1
RTN4-211ENST00000438462 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
RTN4-211ENST00000438462 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
RTN4-211ENST00000438462 PPIP5K2O43314 1243 aa15.69■□□□□ 0.1
RTN4-211ENST00000438462 GPR153Q6NV75 609 aa15.69■□□□□ 0.1
RTN4-211ENST00000438462 SLC51AQ86UW1 340 aa15.69■□□□□ 0.1
RTN4-211ENST00000438462 ZNF333Q96JL9 665 aa15.69■□□□□ 0.1
RTN4-211ENST00000438462 CFHR5Q9BXR6 569 aa15.69■□□□□ 0.1
RTN4-211ENST00000438462 MTMR10Q9NXD2 777 aa15.69■□□□□ 0.1
RTN4-211ENST00000438462 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
RTN4-211ENST00000438462 PPM1GO15355 546 aaPredicted RBP15.68■□□□□ 0.1
RTN4-211ENST00000438462 ALDH1B1P30837 517 aa15.68■□□□□ 0.1
RTN4-211ENST00000438462 AOC3Q16853 763 aa15.68■□□□□ 0.1
RTN4-211ENST00000438462 NBPF5PQ86XG9 351 aaPredicted RBP15.68■□□□□ 0.1
RTN4-211ENST00000438462 TM4SF4P48230 202 aa15.67■□□□□ 0.1
RTN4-211ENST00000438462 SLC4A8Q2Y0W8 1093 aa15.67■□□□□ 0.1
RTN4-211ENST00000438462 CNOT7Q9UIV1 285 aaKnown RBP15.67■□□□□ 0.1
RTN4-211ENST00000438462 EYSQ5T1H1 3165 aa15.67■□□□□ 0.1
RTN4-211ENST00000438462 MUC3AQ02505 3323 aa15.66■□□□□ 0.1
RTN4-211ENST00000438462 CC2D2BQ6DHV5 1058 aa15.66■□□□□ 0.1
RTN4-211ENST00000438462 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
RTN4-211ENST00000438462 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
RTN4-211ENST00000438462 SAMD7Q7Z3H4 446 aa15.65■□□□□ 0.1
RTN4-211ENST00000438462 DCPSQ96C86 337 aaKnown RBP15.65■□□□□ 0.1
RTN4-211ENST00000438462 ZNRF3Q9ULT6 936 aa15.65■□□□□ 0.1
RTN4-211ENST00000438462 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.1
RTN4-211ENST00000438462 WTIPA6NIX2 430 aaPredicted RBP15.64■□□□□ 0.09
RTN4-211ENST00000438462 H7C1D1 291 aa15.64■□□□□ 0.09
RTN4-211ENST00000438462 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
RTN4-211ENST00000438462 SLC39A6Q13433 755 aa15.64■□□□□ 0.09
RTN4-211ENST00000438462 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
RTN4-211ENST00000438462 CDCA5Q96FF9 252 aa15.64■□□□□ 0.09
RTN4-211ENST00000438462 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
RTN4-211ENST00000438462 CAMTA2O94983 1202 aa15.63■□□□□ 0.09
RTN4-211ENST00000438462 EGFRP00533 1210 aa15.63■□□□□ 0.09
RTN4-211ENST00000438462 MYCP01106 439 aaPredicted RBP15.63■□□□□ 0.09
RTN4-211ENST00000438462 C1orf141Q5JVX7 400 aa15.63■□□□□ 0.09
RTN4-211ENST00000438462 RAD17O75943 681 aa15.62■□□□□ 0.09
RTN4-211ENST00000438462 SREBF2Q12772 1141 aa15.62■□□□□ 0.09
RTN4-211ENST00000438462 TBC1D10BQ4KMP7 808 aaPredicted RBP15.62■□□□□ 0.09
RTN4-211ENST00000438462 CD99L2Q8TCZ2 262 aa15.62■□□□□ 0.09
RTN4-211ENST00000438462 ZBTB7BO15156 539 aaPredicted RBP15.61■□□□□ 0.09
RTN4-211ENST00000438462 RPTORQ8N122 1335 aa15.61■□□□□ 0.09
RTN4-211ENST00000438462 TMEM265A0A087WTH1 108 aa15.6■□□□□ 0.09
RTN4-211ENST00000438462 SLC9C1Q4G0N8 1177 aa15.6■□□□□ 0.09
RTN4-211ENST00000438462 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
RTN4-211ENST00000438462 SULF1Q8IWU6 871 aa15.6■□□□□ 0.09
RTN4-211ENST00000438462 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
RTN4-211ENST00000438462 ERO1AQ96HE7 468 aa15.6■□□□□ 0.09
RTN4-211ENST00000438462 NR2E3Q9Y5X4 410 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms