RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.93□□□□□ -0.34
RPE-209ENST00000438191 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
RPE-209ENST00000438191 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
RPE-209ENST00000438191 TRPM4Q8TD43 1214 aa12.92□□□□□ -0.34
RPE-209ENST00000438191 LARGE2Q8N3Y3 721 aa12.91□□□□□ -0.34
RPE-209ENST00000438191 CENPFP49454 3210 aa12.91□□□□□ -0.34
RPE-209ENST00000438191 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
RPE-209ENST00000438191 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
RPE-209ENST00000438191 NPHP1O15259 732 aa12.9□□□□□ -0.34
RPE-209ENST00000438191 GMPSP49915 693 aaPredicted RBP12.9□□□□□ -0.34
RPE-209ENST00000438191 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
RPE-209ENST00000438191 GGNBP2Q9H3C7 697 aa12.9□□□□□ -0.34
RPE-209ENST00000438191 RAPGEFL1Q9UHV5 662 aa12.9□□□□□ -0.34
RPE-209ENST00000438191 FYB1O15117 783 aa12.89□□□□□ -0.35
RPE-209ENST00000438191 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
RPE-209ENST00000438191 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
RPE-209ENST00000438191 TRIM17Q9Y577 477 aa12.89□□□□□ -0.35
RPE-209ENST00000438191 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
RPE-209ENST00000438191 SPTBN5Q9NRC6 3674 aaKnown RBP12.89□□□□□ -0.35
RPE-209ENST00000438191 A0A087WZG4 1122 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 A0A1W2PPC1 479 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
RPE-209ENST00000438191 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 NPC1L1Q9UHC9 1359 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
RPE-209ENST00000438191 MRC1P22897 1456 aa12.87□□□□□ -0.35
RPE-209ENST00000438191 CXCL9Q07325 125 aa12.87□□□□□ -0.35
RPE-209ENST00000438191 NIM1KQ8IY84 436 aa12.87□□□□□ -0.35
RPE-209ENST00000438191 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
RPE-209ENST00000438191 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
RPE-209ENST00000438191 VCANP13611 3396 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 TM4SF4P48230 202 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 MTHFSP49914 203 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 KRT26Q7Z3Y9 468 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 DEFB123Q8N688 67 aa12.86□□□□□ -0.35
RPE-209ENST00000438191 RAB3GAP2Q9H2M9 1393 aa12.85□□□□□ -0.35
RPE-209ENST00000438191 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
RPE-209ENST00000438191 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
RPE-209ENST00000438191 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
RPE-209ENST00000438191 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
RPE-209ENST00000438191 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
RPE-209ENST00000438191 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
RPE-209ENST00000438191 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
RPE-209ENST00000438191 Q7L0L9 218 aa12.84□□□□□ -0.35
RPE-209ENST00000438191 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
RPE-209ENST00000438191 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
RPE-209ENST00000438191 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
RPE-209ENST00000438191 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
RPE-209ENST00000438191 DPF3Q92784 378 aa12.83□□□□□ -0.36
RPE-209ENST00000438191 MTMR10Q9NXD2 777 aa12.83□□□□□ -0.36
RPE-209ENST00000438191 CNOT7Q9UIV1 285 aaKnown RBP12.83□□□□□ -0.36
RPE-209ENST00000438191 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
RPE-209ENST00000438191 ZNF333Q96JL9 665 aa12.82□□□□□ -0.36
RPE-209ENST00000438191 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
RPE-209ENST00000438191 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
RPE-209ENST00000438191 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
RPE-209ENST00000438191 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
RPE-209ENST00000438191 ZNRF3Q9ULT6 936 aa12.81□□□□□ -0.36
RPE-209ENST00000438191 H7C1D1 291 aa12.8□□□□□ -0.36
RPE-209ENST00000438191 PPM1GO15355 546 aaPredicted RBP12.8□□□□□ -0.36
RPE-209ENST00000438191 AOC3Q16853 763 aa12.8□□□□□ -0.36
RPE-209ENST00000438191 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
RPE-209ENST00000438191 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
RPE-209ENST00000438191 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
RPE-209ENST00000438191 WTIPA6NIX2 430 aaPredicted RBP12.79□□□□□ -0.36
RPE-209ENST00000438191 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
RPE-209ENST00000438191 SAMD7Q7Z3H4 446 aa12.79□□□□□ -0.36
RPE-209ENST00000438191 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
RPE-209ENST00000438191 DCPSQ96C86 337 aaKnown RBP12.79□□□□□ -0.36
RPE-209ENST00000438191 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 MICALL2Q8IY33 904 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 CDCA5Q96FF9 252 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 SNX27Q96L92 541 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 KDM3BQ7LBC6 1761 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 ZNF609O15014 1411 aa12.78□□□□□ -0.36
RPE-209ENST00000438191 UBR2Q8IWV8 1755 aa12.77□□□□□ -0.36
RPE-209ENST00000438191 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
RPE-209ENST00000438191 EGFRP00533 1210 aa12.77□□□□□ -0.37
RPE-209ENST00000438191 FKBP1BP68106 108 aa12.77□□□□□ -0.37
RPE-209ENST00000438191 SLC4A8Q2Y0W8 1093 aa12.77□□□□□ -0.37
RPE-209ENST00000438191 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
RPE-209ENST00000438191 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
RPE-209ENST00000438191 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
RPE-209ENST00000438191 RAD17O75943 681 aa12.76□□□□□ -0.37
RPE-209ENST00000438191 STARD3NLO95772 234 aa12.76□□□□□ -0.37
RPE-209ENST00000438191 IL6STP40189 918 aaPredicted RBP12.76□□□□□ -0.37
RPE-209ENST00000438191 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
RPE-209ENST00000438191 TNIP1Q15025 636 aa12.76□□□□□ -0.37
RPE-209ENST00000438191 TBC1D10BQ4KMP7 808 aaPredicted RBP12.76□□□□□ -0.37
RPE-209ENST00000438191 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
RPE-209ENST00000438191 SREBF2Q12772 1141 aa12.75□□□□□ -0.37
RPE-209ENST00000438191 TPTE2Q6XPS3 522 aa12.75□□□□□ -0.37
RPE-209ENST00000438191 CD99L2Q8TCZ2 262 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms