RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 RABL6Q3YEC7 729 aaPredicted RBP24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 KIF1BPQ96EK5 621 aa24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 CCNL1Q9UK58 526 aaPredicted RBP24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 RFX5P48382 616 aaPredicted RBP24.1■■□□□ 1.45
CHRNA7-202ENST00000437966 HSP90AB4PQ58FF6 505 aa24.1■■□□□ 1.45
CHRNA7-202ENST00000437966 ZNF772Q68DY9 489 aaPredicted RBP24.1■■□□□ 1.45
CHRNA7-202ENST00000437966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.1■■□□□ 1.45
CHRNA7-202ENST00000437966 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
CHRNA7-202ENST00000437966 G3BP1Q13283 466 aaKnown RBP eCLIP24.09■■□□□ 1.45
CHRNA7-202ENST00000437966 HSP90AB3PQ58FF7 597 aa24.09■■□□□ 1.45
CHRNA7-202ENST00000437966 COL15A1P39059 1388 aa24.09■■□□□ 1.45
CHRNA7-202ENST00000437966 CAMTA2O94983 1202 aa24.08■■□□□ 1.45
CHRNA7-202ENST00000437966 SBF2Q86WG5 1849 aa24.08■■□□□ 1.45
CHRNA7-202ENST00000437966 MX1P20591 662 aa24.08■■□□□ 1.44
CHRNA7-202ENST00000437966 RBM6P78332 1123 aaKnown RBP24.08■■□□□ 1.44
CHRNA7-202ENST00000437966 BCL11BQ9C0K0 894 aaPredicted RBP24.08■■□□□ 1.44
CHRNA7-202ENST00000437966 BRWD3Q6RI45 1802 aa24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 SASH1O94885 1247 aa24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 PCCAP05165 728 aaPredicted RBP24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 ZBTB38Q8NAP3 1195 aaPredicted RBP24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 RREB1Q92766 1687 aa24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 UBN2Q6ZU65 1347 aa24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 CICQ96RK0 1608 aaPredicted RBP24.07■■□□□ 1.44
CHRNA7-202ENST00000437966 FAM177BA6PVY3 158 aa24.06■■□□□ 1.44
CHRNA7-202ENST00000437966 PTPN12Q05209 780 aaKnown RBP24.06■■□□□ 1.44
CHRNA7-202ENST00000437966 ZNF34Q8IZ26 560 aa24.06■■□□□ 1.44
CHRNA7-202ENST00000437966 CCDC85AQ96PX6 553 aaPredicted RBP24.06■■□□□ 1.44
CHRNA7-202ENST00000437966 TRIM37O94972 964 aa24.06■■□□□ 1.44
CHRNA7-202ENST00000437966 OSBPL3Q9H4L5 887 aa24.06■■□□□ 1.44
CHRNA7-202ENST00000437966 SDSP20132 328 aa24.05■■□□□ 1.44
CHRNA7-202ENST00000437966 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
CHRNA7-202ENST00000437966 TRMT112Q9UI30 125 aaKnown RBP24.05■■□□□ 1.44
CHRNA7-202ENST00000437966 NUP98P52948 1817 aa24.05■■□□□ 1.44
CHRNA7-202ENST00000437966 ANP32AP39687 249 aaKnown RBP24.04■■□□□ 1.44
CHRNA7-202ENST00000437966 ERC1Q8IUD2 1116 aa24.04■■□□□ 1.44
CHRNA7-202ENST00000437966 COPRSQ9NQ92 184 aa24.04■■□□□ 1.44
CHRNA7-202ENST00000437966 CNTNAP4Q9C0A0 1308 aa24.04■■□□□ 1.44
CHRNA7-202ENST00000437966 MFAP1P55081 439 aaKnown RBP24.03■■□□□ 1.44
CHRNA7-202ENST00000437966 ZNF594Q96JF6 807 aaPredicted RBP24.03■■□□□ 1.44
CHRNA7-202ENST00000437966 SUSD4Q5VX71 490 aa24.03■■□□□ 1.44
CHRNA7-202ENST00000437966 STAP2Q9UGK3 403 aa24.03■■□□□ 1.44
CHRNA7-202ENST00000437966 ZNF831Q5JPB2 1677 aa24.03■■□□□ 1.44
CHRNA7-202ENST00000437966 GNPATO15228 680 aa24.02■■□□□ 1.44
CHRNA7-202ENST00000437966 TBC1D9Q6ZT07 1266 aa24.02■■□□□ 1.44
CHRNA7-202ENST00000437966 AMIGO3Q86WK7 504 aa24.02■■□□□ 1.44
CHRNA7-202ENST00000437966 CLASRPQ8N2M8 674 aaKnown RBP24.02■■□□□ 1.44
CHRNA7-202ENST00000437966 LRRC4BQ9NT99 713 aa24.01■■□□□ 1.43
CHRNA7-202ENST00000437966 RC3H1Q5TC82 1133 aaKnown RBP24.01■■□□□ 1.43
CHRNA7-202ENST00000437966 AACSQ86V21 672 aa24.01■■□□□ 1.43
CHRNA7-202ENST00000437966 IRS4O14654 1257 aaPredicted RBP24■■□□□ 1.43
CHRNA7-202ENST00000437966 MAP4K4O95819 1239 aaPredicted RBP24■■□□□ 1.43
CHRNA7-202ENST00000437966 CCDC8Q9H0W5 538 aaPredicted RBP24■■□□□ 1.43
CHRNA7-202ENST00000437966 NIP7Q9Y221 180 aaKnown RBP eCLIP24■■□□□ 1.43
CHRNA7-202ENST00000437966 ANKRD36CQ5JPF3 1778 aa24■■□□□ 1.43
CHRNA7-202ENST00000437966 CDC45O75419 566 aa23.99■■□□□ 1.43
CHRNA7-202ENST00000437966 RPS6KA4O75676 772 aa23.99■■□□□ 1.43
CHRNA7-202ENST00000437966 RXRBP28702 533 aa23.99■■□□□ 1.43
CHRNA7-202ENST00000437966 TFCP2Q12800 502 aa23.99■■□□□ 1.43
CHRNA7-202ENST00000437966 EAF2Q96CJ1 260 aaPredicted RBP23.99■■□□□ 1.43
CHRNA7-202ENST00000437966 SRP68Q9UHB9 627 aaKnown RBP23.99■■□□□ 1.43
CHRNA7-202ENST00000437966 IFIT2P09913 472 aaKnown RBP23.98■■□□□ 1.43
CHRNA7-202ENST00000437966 PLA2G12BQ9BX93 195 aa23.98■■□□□ 1.43
CHRNA7-202ENST00000437966 RGS17Q9UGC6 210 aaPredicted RBP23.98■■□□□ 1.43
CHRNA7-202ENST00000437966 CDHR2Q9BYE9 1310 aa23.98■■□□□ 1.43
CHRNA7-202ENST00000437966 EP400Q96L91 3159 aa23.98■■□□□ 1.43
CHRNA7-202ENST00000437966 LY75O60449 1722 aa23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 TRIM6-TRIM34B2RNG4 842 aa23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 LRRC24Q50LG9 513 aa23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 PI4K2BQ8TCG2 481 aa23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 RILPL2Q969X0 211 aa23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 PUS3Q9BZE2 481 aaKnown RBP23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 TLR7Q9NYK1 1049 aaKnown RBP23.97■■□□□ 1.43
CHRNA7-202ENST00000437966 CSF1RP07333 972 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 USPL1Q5W0Q7 1092 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 PHF14O94880 888 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 CCDC57Q2TAC2 916 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 ATG9AQ7Z3C6 839 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 UPF2Q9HAU5 1272 aaKnown RBP23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 BCL2L12Q9HB09 334 aa23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 RTCBQ9Y3I0 505 aaKnown RBP23.96■■□□□ 1.43
CHRNA7-202ENST00000437966 TTLL11Q8NHH1 800 aa23.95■■□□□ 1.42
CHRNA7-202ENST00000437966 ARHGEF1Q92888 912 aaKnown RBP23.95■■□□□ 1.42
CHRNA7-202ENST00000437966 ZNF652Q9Y2D9 606 aa23.95■■□□□ 1.42
CHRNA7-202ENST00000437966 CTSWP56202 376 aa23.94■■□□□ 1.42
CHRNA7-202ENST00000437966 POTEAQ6S8J7 498 aa23.94■■□□□ 1.42
CHRNA7-202ENST00000437966 GREM2Q9H772 168 aa23.94■■□□□ 1.42
CHRNA7-202ENST00000437966 AOX1Q06278 1338 aa23.94■■□□□ 1.42
CHRNA7-202ENST00000437966 MSH5O43196 834 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 PARP10Q53GL7 1025 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 FBXO41Q8TF61 875 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 PDE8AO60658 829 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 TBC1D9BQ66K14 1250 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 AK7Q96M32 723 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
CHRNA7-202ENST00000437966 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
CHRNA7-202ENST00000437966 EYA2O00167 538 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms