RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 FGD1P98174 961 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 MST1RQ04912 1400 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 FIBPO43427 364 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
NEFM-203ENST00000437366 ZNF594Q96JF6 807 aaPredicted RBP13.79□□□□□ -0.2
NEFM-203ENST00000437366 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 CCDC129Q6ZRS4 1044 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
NEFM-203ENST00000437366 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
NEFM-203ENST00000437366 LARGE1O95461 756 aa13.78□□□□□ -0.2
NEFM-203ENST00000437366 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
NEFM-203ENST00000437366 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
NEFM-203ENST00000437366 TIMM10P62072 90 aa13.78□□□□□ -0.2
NEFM-203ENST00000437366 SLFNL1Q499Z3 407 aa13.77□□□□□ -0.2
NEFM-203ENST00000437366 PPFIA3O75145 1194 aa13.77□□□□□ -0.21
NEFM-203ENST00000437366 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
NEFM-203ENST00000437366 SEC62Q99442 399 aaKnown RBP13.77□□□□□ -0.21
NEFM-203ENST00000437366 DBNLQ9UJU6 430 aaKnown RBP13.77□□□□□ -0.21
NEFM-203ENST00000437366 CCDC171Q6TFL3 1326 aa13.77□□□□□ -0.21
NEFM-203ENST00000437366 BRD1O95696 1058 aa13.77□□□□□ -0.21
NEFM-203ENST00000437366 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
NEFM-203ENST00000437366 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
NEFM-203ENST00000437366 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.21
NEFM-203ENST00000437366 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.77□□□□□ -0.21
NEFM-203ENST00000437366 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
NEFM-203ENST00000437366 HSP90B1P14625 803 aaKnown RBP13.76□□□□□ -0.21
NEFM-203ENST00000437366 IL2RBP14784 551 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 FOSBP53539 338 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
NEFM-203ENST00000437366 CUL4AQ13619 759 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 NBPF10Q6P3W6 841 aaKnown RBP13.76□□□□□ -0.21
NEFM-203ENST00000437366 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 FPGT-TNNI3KV9GXZ4 949 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
NEFM-203ENST00000437366 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 TNS3Q68CZ2 1445 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 GJB2P29033 226 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 COL9A3Q14050 684 aaPredicted RBP13.76□□□□□ -0.21
NEFM-203ENST00000437366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
NEFM-203ENST00000437366 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
NEFM-203ENST00000437366 PLBD2Q8NHP8 589 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 LRRC2Q9BYS8 371 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 TAF6LQ9Y6J9 622 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 SLIT3O75094 1523 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 GOLIM4O00461 696 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 GPTP24298 496 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 INTS4Q96HW7 963 aaKnown RBP13.75□□□□□ -0.21
NEFM-203ENST00000437366 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 STX6O43752 255 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 SYT1P21579 422 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
NEFM-203ENST00000437366 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 MPNDQ8N594 471 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
NEFM-203ENST00000437366 CWC25Q9NXE8 425 aaPredicted RBP13.75□□□□□ -0.21
NEFM-203ENST00000437366 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
NEFM-203ENST00000437366 MED1Q15648 1581 aaPredicted RBP13.74□□□□□ -0.21
NEFM-203ENST00000437366 HIP1O00291 1037 aa13.74□□□□□ -0.21
NEFM-203ENST00000437366 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
NEFM-203ENST00000437366 RBSNQ9H1K0 784 aa13.74□□□□□ -0.21
NEFM-203ENST00000437366 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
NEFM-203ENST00000437366 SLC27A2O14975 620 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 FAM89AQ96GI7 184 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 LRRC24Q50LG9 513 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 ME3Q16798 604 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 ASAP1Q9ULH1 1129 aa13.73□□□□□ -0.21
NEFM-203ENST00000437366 FAM173BQ6P4H8 233 aa13.72□□□□□ -0.21
NEFM-203ENST00000437366 TTC14Q96N46 770 aa13.72□□□□□ -0.21
NEFM-203ENST00000437366 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
NEFM-203ENST00000437366 PSMA5P28066 241 aa13.72□□□□□ -0.21
NEFM-203ENST00000437366 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
NEFM-203ENST00000437366 TPCN1Q9ULQ1 816 aa13.72□□□□□ -0.21
NEFM-203ENST00000437366 MBD3O95983 291 aa13.71□□□□□ -0.21
NEFM-203ENST00000437366 ZSCAN22P10073 491 aaPredicted RBP13.71□□□□□ -0.21
NEFM-203ENST00000437366 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
NEFM-203ENST00000437366 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
NEFM-203ENST00000437366 PUS3Q9BZE2 481 aaKnown RBP13.71□□□□□ -0.21
NEFM-203ENST00000437366 COPRSQ9NQ92 184 aa13.71□□□□□ -0.21
NEFM-203ENST00000437366 ZNF142P52746 1687 aaPredicted RBP13.71□□□□□ -0.21
NEFM-203ENST00000437366 UTYO14607 1347 aa13.71□□□□□ -0.21
NEFM-203ENST00000437366 USP42Q9H9J4 1324 aaKnown RBP13.71□□□□□ -0.21
NEFM-203ENST00000437366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.21
NEFM-203ENST00000437366 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms