RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 RGMBQ6NW40 437 aa14.18□□□□□ -0.14
CPNE1-214ENST00000435747 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
CPNE1-214ENST00000435747 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-214ENST00000435747 FAM155AB1AL88 458 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-214ENST00000435747 CAMTA2O94983 1202 aa14.17□□□□□ -0.14
CPNE1-214ENST00000435747 IL6STP40189 918 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-214ENST00000435747 CDC37L1Q7L3B6 337 aa14.17□□□□□ -0.14
CPNE1-214ENST00000435747 CCDC102AQ96A19 550 aa14.17□□□□□ -0.14
CPNE1-214ENST00000435747 PANK3Q9H999 370 aa14.17□□□□□ -0.14
CPNE1-214ENST00000435747 SNED1Q8TER0 1413 aa14.16□□□□□ -0.14
CPNE1-214ENST00000435747 NIM1KQ8IY84 436 aa14.16□□□□□ -0.14
CPNE1-214ENST00000435747 TTC5Q8N0Z6 440 aa14.16□□□□□ -0.14
CPNE1-214ENST00000435747 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
CPNE1-214ENST00000435747 HDAC9Q9UKV0 1011 aa14.16□□□□□ -0.14
CPNE1-214ENST00000435747 RNMTO43148 476 aaKnown RBP14.15□□□□□ -0.14
CPNE1-214ENST00000435747 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
CPNE1-214ENST00000435747 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
CPNE1-214ENST00000435747 ZC3H15Q8WU90 426 aaKnown RBP14.15□□□□□ -0.14
CPNE1-214ENST00000435747 ZNF157P51786 506 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-214ENST00000435747 TPTE2Q6XPS3 522 aa14.14□□□□□ -0.15
CPNE1-214ENST00000435747 DZIP3Q86Y13 1208 aaKnown RBP14.14□□□□□ -0.15
CPNE1-214ENST00000435747 TEX13AQ9BXU3 409 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-214ENST00000435747 KIF7Q2M1P5 1343 aa14.14□□□□□ -0.15
CPNE1-214ENST00000435747 POLR2AP24928 1970 aaKnown RBP14.13□□□□□ -0.15
CPNE1-214ENST00000435747 SLC17A8Q8NDX2 589 aa14.13□□□□□ -0.15
CPNE1-214ENST00000435747 GMPSP49915 693 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-214ENST00000435747 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
CPNE1-214ENST00000435747 USP48Q86UV5 1035 aa14.12□□□□□ -0.15
CPNE1-214ENST00000435747 C2orf69Q8N8R5 385 aa14.12□□□□□ -0.15
CPNE1-214ENST00000435747 CSRNP1Q96S65 589 aa14.12□□□□□ -0.15
CPNE1-214ENST00000435747 POLR3GLQ9BT43 218 aa14.12□□□□□ -0.15
CPNE1-214ENST00000435747 GBA2Q9HCG7 927 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-214ENST00000435747 ZNF652Q9Y2D9 606 aa14.12□□□□□ -0.15
CPNE1-214ENST00000435747 NPC1L1Q9UHC9 1359 aa14.11□□□□□ -0.15
CPNE1-214ENST00000435747 PPIP5K2O43314 1243 aa14.11□□□□□ -0.15
CPNE1-214ENST00000435747 HIRAP54198 1017 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-214ENST00000435747 FBXO46Q6PJ61 603 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-214ENST00000435747 CLEC4GQ6UXB4 293 aa14.11□□□□□ -0.15
CPNE1-214ENST00000435747 HEG1Q9ULI3 1381 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 FAM177BA6PVY3 158 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 A1BGP04217 495 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 SLC10A3P09131 477 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-214ENST00000435747 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-214ENST00000435747 TRPM4Q8TD43 1214 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 CDHR2Q9BYE9 1310 aa14.1□□□□□ -0.15
CPNE1-214ENST00000435747 PER1O15534 1290 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-214ENST00000435747 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-214ENST00000435747 CXCL9Q07325 125 aa14.09□□□□□ -0.15
CPNE1-214ENST00000435747 ZNF296Q8WUU4 475 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-214ENST00000435747 ZNF496Q96IT1 587 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-214ENST00000435747 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-214ENST00000435747 NIP7Q9Y221 180 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPNE1-214ENST00000435747 AOC3Q16853 763 aa14.08□□□□□ -0.16
CPNE1-214ENST00000435747 DLK2Q6UY11 383 aa14.08□□□□□ -0.16
CPNE1-214ENST00000435747 ZNRF3Q9ULT6 936 aa14.08□□□□□ -0.16
CPNE1-214ENST00000435747 CENPFP49454 3210 aa14.07□□□□□ -0.16
CPNE1-214ENST00000435747 H7C1D1 291 aa14.06□□□□□ -0.16
CPNE1-214ENST00000435747 CRY2Q49AN0 593 aa14.06□□□□□ -0.16
CPNE1-214ENST00000435747 KRT26Q7Z3Y9 468 aa14.06□□□□□ -0.16
CPNE1-214ENST00000435747 RPGRQ92834 1020 aaKnown RBP14.06□□□□□ -0.16
CPNE1-214ENST00000435747 COL6A3P12111 3177 aa14.06□□□□□ -0.16
CPNE1-214ENST00000435747 HTTP42858 3142 aa14.06□□□□□ -0.16
CPNE1-214ENST00000435747 TCERG1O14776 1098 aaKnown RBP14.05□□□□□ -0.16
CPNE1-214ENST00000435747 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
CPNE1-214ENST00000435747 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
CPNE1-214ENST00000435747 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-214ENST00000435747 VPS33BQ9H267 617 aa14.05□□□□□ -0.16
CPNE1-214ENST00000435747 CNOT7Q9UIV1 285 aaKnown RBP14.05□□□□□ -0.16
CPNE1-214ENST00000435747 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
CPNE1-214ENST00000435747 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-214ENST00000435747 TNIP1Q15025 636 aa14.04□□□□□ -0.16
CPNE1-214ENST00000435747 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
CPNE1-214ENST00000435747 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
CPNE1-214ENST00000435747 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
CPNE1-214ENST00000435747 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
CPNE1-214ENST00000435747 BRCA2P51587 3418 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 SHTN1A0MZ66 631 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 GPR25O00155 361 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 RAD17O75943 681 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 PIP4K2AP48426 406 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-214ENST00000435747 INTS3Q68E01 1043 aaKnown RBP14.03□□□□□ -0.16
CPNE1-214ENST00000435747 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 RASAL3Q86YV0 1011 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 MICALL2Q8IY33 904 aa14.03□□□□□ -0.16
CPNE1-214ENST00000435747 RANBP2P49792 3224 aaKnown RBP14.02□□□□□ -0.16
CPNE1-214ENST00000435747 ABCC12Q96J65 1359 aa14.02□□□□□ -0.17
CPNE1-214ENST00000435747 ADM5C9JUS6 153 aa14.02□□□□□ -0.17
CPNE1-214ENST00000435747 HOXA10P31260 410 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-214ENST00000435747 IL13P35225 146 aa14.02□□□□□ -0.17
CPNE1-214ENST00000435747 TEFQ10587 303 aa14.02□□□□□ -0.17
CPNE1-214ENST00000435747 MTHFSDQ2M296 383 aaKnown RBP14.02□□□□□ -0.17
CPNE1-214ENST00000435747 SLC51AQ86UW1 340 aa14.02□□□□□ -0.17
CPNE1-214ENST00000435747 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
CPNE1-214ENST00000435747 DCPSQ96C86 337 aaKnown RBP14.02□□□□□ -0.17
CPNE1-214ENST00000435747 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.17
CPNE1-214ENST00000435747 RGL2O15211 777 aa14.01□□□□□ -0.17
CPNE1-214ENST00000435747 NOM1Q5C9Z4 860 aaKnown RBP14.01□□□□□ -0.17
CPNE1-214ENST00000435747 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms