RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TJP1Q07157 1748 aa20.2■□□□□ 0.82
LIMK1-203ENST00000435201 PTPN12Q05209 780 aaKnown RBP20.2■□□□□ 0.82
LIMK1-203ENST00000435201 UPF3BQ9BZI7 483 aaKnown RBP20.2■□□□□ 0.82
LIMK1-203ENST00000435201 BRPF3Q9ULD4 1205 aa20.2■□□□□ 0.82
LIMK1-203ENST00000435201 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.2■□□□□ 0.82
LIMK1-203ENST00000435201 CWC25Q9NXE8 425 aaPredicted RBP20.19■□□□□ 0.82
LIMK1-203ENST00000435201 TLR7Q9NYK1 1049 aaKnown RBP20.19■□□□□ 0.82
LIMK1-203ENST00000435201 H7C1W4 665 aa20.18■□□□□ 0.82
LIMK1-203ENST00000435201 PKP1Q13835 747 aa20.18■□□□□ 0.82
LIMK1-203ENST00000435201 COL14A1Q05707 1796 aaKnown RBP20.18■□□□□ 0.82
LIMK1-203ENST00000435201 SNRKQ9NRH2 765 aa20.18■□□□□ 0.82
LIMK1-203ENST00000435201 TMOD3Q9NYL9 352 aa20.18■□□□□ 0.82
LIMK1-203ENST00000435201 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
LIMK1-203ENST00000435201 TNNI3KQ59H18 835 aa20.17■□□□□ 0.82
LIMK1-203ENST00000435201 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
LIMK1-203ENST00000435201 JARID2Q92833 1246 aaPredicted RBP20.17■□□□□ 0.82
LIMK1-203ENST00000435201 FPGT-TNNI3KV9GXZ4 949 aa20.17■□□□□ 0.82
LIMK1-203ENST00000435201 A1BGP04217 495 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 KCNB2Q92953 911 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 ZDHHC9Q9Y397 364 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 RASEFQ8IZ41 740 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 CCDC191Q8NCU4 936 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 TTC14Q96N46 770 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 FSD1Q9BTV5 496 aa20.16■□□□□ 0.82
LIMK1-203ENST00000435201 ATP5JP18859 108 aa20.15■□□□□ 0.82
LIMK1-203ENST00000435201 MRE11P49959 708 aa20.15■□□□□ 0.82
LIMK1-203ENST00000435201 NOL8Q76FK4 1167 aaKnown RBP20.15■□□□□ 0.82
LIMK1-203ENST00000435201 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
LIMK1-203ENST00000435201 RFX7Q2KHR2 1363 aa20.15■□□□□ 0.82
LIMK1-203ENST00000435201 FOXO4P98177 505 aa20.14■□□□□ 0.81
LIMK1-203ENST00000435201 PTH1RQ03431 593 aa20.14■□□□□ 0.81
LIMK1-203ENST00000435201 TFCP2Q12800 502 aa20.14■□□□□ 0.81
LIMK1-203ENST00000435201 NMIQ13287 307 aaPredicted RBP20.14■□□□□ 0.81
LIMK1-203ENST00000435201 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.81
LIMK1-203ENST00000435201 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.81
LIMK1-203ENST00000435201 TM6SF1Q9BZW5 370 aa20.14■□□□□ 0.81
LIMK1-203ENST00000435201 PLCH1Q4KWH8 1693 aa20.14■□□□□ 0.81
LIMK1-203ENST00000435201 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
LIMK1-203ENST00000435201 DBNLQ9UJU6 430 aaKnown RBP20.13■□□□□ 0.81
LIMK1-203ENST00000435201 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
LIMK1-203ENST00000435201 BRD1O95696 1058 aa20.13■□□□□ 0.81
LIMK1-203ENST00000435201 BTG4Q9NY30 223 aa20.13■□□□□ 0.81
LIMK1-203ENST00000435201 ZKSCAN1P17029 563 aaPredicted RBP20.12■□□□□ 0.81
LIMK1-203ENST00000435201 FAM227BQ96M60 508 aa20.12■□□□□ 0.81
LIMK1-203ENST00000435201 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
LIMK1-203ENST00000435201 DISP2A7MBM2 1401 aa20.12■□□□□ 0.81
LIMK1-203ENST00000435201 LRP6O75581 1613 aa20.12■□□□□ 0.81
LIMK1-203ENST00000435201 COL22A1Q8NFW1 1626 aaPredicted RBP20.12■□□□□ 0.81
LIMK1-203ENST00000435201 ITGB4P16144 1822 aa20.12■□□□□ 0.81
LIMK1-203ENST00000435201 XRCC6P12956 609 aaKnown RBP eCLIP20.11■□□□□ 0.81
LIMK1-203ENST00000435201 CASTP20810 708 aaKnown RBP20.11■□□□□ 0.81
LIMK1-203ENST00000435201 AK2P54819 239 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 NECTIN1Q15223 517 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
LIMK1-203ENST00000435201 MAP4K1Q92918 833 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 ZBTB3Q9H5J0 574 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 LIMCH1Q9UPQ0 1083 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 VPS53Q5VIR6 699 aa20.11■□□□□ 0.81
LIMK1-203ENST00000435201 RBM8AQ9Y5S9 174 aaKnown RBP20.11■□□□□ 0.81
LIMK1-203ENST00000435201 JCADQ9P266 1359 aa20.1■□□□□ 0.81
LIMK1-203ENST00000435201 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
LIMK1-203ENST00000435201 GPR108Q9NPR9 543 aa20.1■□□□□ 0.81
LIMK1-203ENST00000435201 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
LIMK1-203ENST00000435201 AHDC1Q5TGY3 1603 aaPredicted RBP20.1■□□□□ 0.81
LIMK1-203ENST00000435201 A0A0D9SFI3 127 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 KCNJ4P48050 445 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 JAKMIP1Q96N16 626 aaKnown RBP20.09■□□□□ 0.81
LIMK1-203ENST00000435201 ISCA1Q9BUE6 129 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 CYP46A1Q9Y6A2 500 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 IL15P40933 162 aaPredicted RBP20.09■□□□□ 0.81
LIMK1-203ENST00000435201 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 CREB3L3Q68CJ9 461 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 GRPEL1Q9HAV7 217 aa20.09■□□□□ 0.81
LIMK1-203ENST00000435201 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
LIMK1-203ENST00000435201 WDR33Q9C0J8 1336 aaKnown RBP20.08■□□□□ 0.81
LIMK1-203ENST00000435201 WNK3Q9BYP7 1800 aa20.08■□□□□ 0.81
LIMK1-203ENST00000435201 RUFY3Q7L099 469 aa20.08■□□□□ 0.81
LIMK1-203ENST00000435201 PIGBQ92521 554 aa20.08■□□□□ 0.81
LIMK1-203ENST00000435201 PSMA5P28066 241 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 TCIRG1Q13488 830 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 ZSCAN31Q96LW9 406 aaPredicted RBP20.07■□□□□ 0.8
LIMK1-203ENST00000435201 HAUS7Q99871 368 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 PDRG1Q9NUG6 133 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
LIMK1-203ENST00000435201 CIAO1O76071 339 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 STARD3NLO95772 234 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 TRIM28Q13263 835 aaKnown RBP20.07■□□□□ 0.8
LIMK1-203ENST00000435201 ATG9AQ7Z3C6 839 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 TICAM2Q86XR7 235 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 ARXQ96QS3 562 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 HMG20BQ9P0W2 317 aa20.07■□□□□ 0.8
LIMK1-203ENST00000435201 COL16A1Q07092 1604 aaPredicted RBP20.07■□□□□ 0.8
LIMK1-203ENST00000435201 SH2B1Q9NRF2 756 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms