RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 LARGE1O95461 756 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SYT1P21579 422 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SYAP1Q96A49 352 aaPredicted RBP19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 JAKMIP1Q96N16 626 aaKnown RBP19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 CCDC8Q9H0W5 538 aaPredicted RBP19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 COPRSQ9NQ92 184 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SH2B1Q9NRF2 756 aaPredicted RBP19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 PDRG1Q9NUG6 133 aa19.32■□□□□ 0.68
HLA-DQB2-231ENST00000435145 MED23Q9ULK4 1368 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 STX6O43752 255 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 MYL6BP14649 208 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 CPA1P15085 419 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 NMIQ13287 307 aaPredicted RBP19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 FAM227BQ96M60 508 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 CYP46A1Q9Y6A2 500 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 TMEM94Q12767 1356 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 TNS3Q68CZ2 1445 aa19.31■□□□□ 0.68
HLA-DQB2-231ENST00000435145 CYP27B1O15528 508 aa19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 CREB3L3Q68CJ9 461 aa19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 MYD88Q99836 296 aa19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SMC3Q9UQE7 1217 aa19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 PARP4Q9UKK3 1724 aaKnown RBP19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ATF3P18847 181 aa19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 RABL6Q3YEC7 729 aaPredicted RBP19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ANKRD13DQ6ZTN6 518 aa19.3■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ST3GAL1Q11201 340 aa19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 USP16Q9Y5T5 823 aa19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 CPDO75976 1380 aa19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 F13A1P00488 732 aa19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 GDPD2Q9HCC8 539 aa19.29■□□□□ 0.68
HLA-DQB2-231ENST00000435145 STRCP1A6NGW2 1772 aa19.28■□□□□ 0.68
HLA-DQB2-231ENST00000435145 A0A0D9SFI3 127 aa19.28■□□□□ 0.68
HLA-DQB2-231ENST00000435145 FMNL2Q96PY5 1086 aa19.28■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SIL1Q9H173 461 aa19.28■□□□□ 0.68
HLA-DQB2-231ENST00000435145 LAMB4A4D0S4 1761 aa19.28■□□□□ 0.68
HLA-DQB2-231ENST00000435145 SLC27A2O14975 620 aa19.27■□□□□ 0.68
HLA-DQB2-231ENST00000435145 PHF14O94880 888 aa19.27■□□□□ 0.68
HLA-DQB2-231ENST00000435145 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
HLA-DQB2-231ENST00000435145 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ALDH8A1Q9H2A2 487 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB2-231ENST00000435145 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
HLA-DQB2-231ENST00000435145 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.67
HLA-DQB2-231ENST00000435145 BOLA2Q9H3K6 86 aa19.27■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TSPY26PQ9H489 355 aa19.27■□□□□ 0.67
HLA-DQB2-231ENST00000435145 RFX7Q2KHR2 1363 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 ATP5JP18859 108 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 ME3Q16798 604 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TSGA10IPQ3SY00 556 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CCDC83Q8IWF9 413 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 FSD1Q9BTV5 496 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 MTMR6Q9Y217 621 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CNPY2Q9Y2B0 182 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 ATP6V1DQ9Y5K8 247 aa19.26■□□□□ 0.67
HLA-DQB2-231ENST00000435145 GJB2P29033 226 aa19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CASP7P55210 303 aa19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 FOXD4L6Q3SYB3 417 aaPredicted RBP19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 FOXD4L3Q6VB84 417 aaPredicted RBP19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TCHHQ07283 1943 aa19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CSB-PGBD3P0DP91 1061 aa19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 PSMA5P28066 241 aa19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 NOL7Q9UMY1 257 aaKnown RBP19.25■□□□□ 0.67
HLA-DQB2-231ENST00000435145 SPATA31A3Q5VYP0 1347 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 UBE2HP62256 183 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TNNI3KQ59H18 835 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CABLES1Q8TDN4 633 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 DBNLQ9UJU6 430 aaKnown RBP19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 FPGT-TNNI3KV9GXZ4 949 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 AFDNP55196 1824 aaKnown RBP19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CCDC183Q5T5S1 534 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 USPL1Q5W0Q7 1092 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 PLBD2Q8NHP8 589 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 HMG20BQ9P0W2 317 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
HLA-DQB2-231ENST00000435145 PDIA4P13667 645 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CHRNA2Q15822 529 aa19.23■□□□□ 0.67
HLA-DQB2-231ENST00000435145 RNF20Q5VTR2 975 aa19.23■□□□□ 0.67
HLA-DQB2-231ENST00000435145 NAP1L5Q96NT1 182 aaPredicted RBP19.23■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TAF5LO75529 589 aa19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 KCNJ4P48050 445 aa19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 ZNF589Q86UQ0 364 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CADPS2Q86UW7 1296 aa19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 CABP4P57796 275 aa19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 TFCP2Q12800 502 aa19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 COL9A3Q14050 684 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB2-231ENST00000435145 RPS6KB1P23443 525 aa19.21■□□□□ 0.67
HLA-DQB2-231ENST00000435145 PIP4K2AP48426 406 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB2-231ENST00000435145 ANKRD1Q15327 319 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms