RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 NIP7Q9Y221 180 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC01055-201ENST00000435067 UTYO14607 1347 aa13.02□□□□□ -0.33
LINC01055-201ENST00000435067 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
LINC01055-201ENST00000435067 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
LINC01055-201ENST00000435067 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
LINC01055-201ENST00000435067 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
LINC01055-201ENST00000435067 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
LINC01055-201ENST00000435067 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
LINC01055-201ENST00000435067 SCN7AQ01118 1682 aa13.01□□□□□ -0.33
LINC01055-201ENST00000435067 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
LINC01055-201ENST00000435067 H7C1W4 665 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 MSH5O43196 834 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 CEP85Q6P2H3 762 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 FAM89AQ96GI7 184 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 SUCLG2Q96I99 432 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
LINC01055-201ENST00000435067 CASP7P55210 303 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 RPAP2Q8IXW5 612 aaPredicted RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 ANKRD44Q8N8A2 993 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
LINC01055-201ENST00000435067 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 HDAC5Q9UQL6 1122 aa12.99□□□□□ -0.33
LINC01055-201ENST00000435067 PNPLA7Q6ZV29 1317 aa12.98□□□□□ -0.33
LINC01055-201ENST00000435067 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
LINC01055-201ENST00000435067 RGL2O15211 777 aa12.98□□□□□ -0.33
LINC01055-201ENST00000435067 GYS1P13807 737 aa12.98□□□□□ -0.33
LINC01055-201ENST00000435067 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
LINC01055-201ENST00000435067 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
LINC01055-201ENST00000435067 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
LINC01055-201ENST00000435067 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
LINC01055-201ENST00000435067 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
LINC01055-201ENST00000435067 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
LINC01055-201ENST00000435067 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
LINC01055-201ENST00000435067 SETDB2Q96T68 719 aa12.97□□□□□ -0.33
LINC01055-201ENST00000435067 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
LINC01055-201ENST00000435067 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.33
LINC01055-201ENST00000435067 SRGAP3O43295 1099 aa12.96□□□□□ -0.34
LINC01055-201ENST00000435067 NTSR2O95665 410 aa12.96□□□□□ -0.34
LINC01055-201ENST00000435067 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.34
LINC01055-201ENST00000435067 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
LINC01055-201ENST00000435067 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
LINC01055-201ENST00000435067 HMMRO75330 724 aa12.95□□□□□ -0.34
LINC01055-201ENST00000435067 FOXO4P98177 505 aa12.95□□□□□ -0.34
LINC01055-201ENST00000435067 NFIXQ14938 502 aa12.95□□□□□ -0.34
LINC01055-201ENST00000435067 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
LINC01055-201ENST00000435067 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
LINC01055-201ENST00000435067 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
LINC01055-201ENST00000435067 MTX1Q13505 466 aa12.94□□□□□ -0.34
LINC01055-201ENST00000435067 LMBR1LQ6UX01 489 aa12.94□□□□□ -0.34
LINC01055-201ENST00000435067 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
LINC01055-201ENST00000435067 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
LINC01055-201ENST00000435067 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
LINC01055-201ENST00000435067 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
LINC01055-201ENST00000435067 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 NPHP1O15259 732 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 TM4SF1P30408 202 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 POLA2Q14181 598 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
LINC01055-201ENST00000435067 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
LINC01055-201ENST00000435067 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
LINC01055-201ENST00000435067 COL24A1Q17RW2 1714 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 PDE8AO60658 829 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 TPTE2Q6XPS3 522 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 CCDC24Q8N4L8 307 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 PLA2G12BQ9BX93 195 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
LINC01055-201ENST00000435067 APBB1O00213 710 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 CTSWP56202 376 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 KLHDC4Q8TBB5 520 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
LINC01055-201ENST00000435067 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 SURF6O75683 361 aaKnown RBP12.91□□□□□ -0.34
LINC01055-201ENST00000435067 SERPINB2P05120 415 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 DDR1Q08345 913 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
LINC01055-201ENST00000435067 ABCC12Q96J65 1359 aa12.9□□□□□ -0.34
LINC01055-201ENST00000435067 DDX60Q8IY21 1712 aaKnown RBP12.9□□□□□ -0.34
LINC01055-201ENST00000435067 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
LINC01055-201ENST00000435067 CSF1RP07333 972 aa12.9□□□□□ -0.34
LINC01055-201ENST00000435067 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms