RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 ATP5J2-PTCD1G3V325 749 aa15.92■□□□□ 0.14
SCRN1-207ENST00000434476 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
SCRN1-207ENST00000434476 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
SCRN1-207ENST00000434476 TICAM2Q86XR7 235 aa15.92■□□□□ 0.14
SCRN1-207ENST00000434476 CCDC191Q8NCU4 936 aa15.92■□□□□ 0.14
SCRN1-207ENST00000434476 DDX54Q8TDD1 881 aaKnown RBP15.92■□□□□ 0.14
SCRN1-207ENST00000434476 UPF3BQ9BZI7 483 aaKnown RBP15.92■□□□□ 0.14
SCRN1-207ENST00000434476 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 BRD1O95696 1058 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 XRCC6P12956 609 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCRN1-207ENST00000434476 TNNI3KQ59H18 835 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 MCTP1Q6DN14 999 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 LMBRD1Q9NUN5 540 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
SCRN1-207ENST00000434476 FPGT-TNNI3KV9GXZ4 949 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 ABCA3Q99758 1704 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 ARFGEF2Q9Y6D5 1785 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 FOXO4P98177 505 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 PKP1Q13835 747 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 NECTIN1Q15223 517 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 MAP4K1Q92918 833 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 GPR108Q9NPR9 543 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
SCRN1-207ENST00000434476 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
SCRN1-207ENST00000434476 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 CCDC171Q6TFL3 1326 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 A1BGP04217 495 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 ZKSCAN1P17029 563 aaPredicted RBP15.9■□□□□ 0.14
SCRN1-207ENST00000434476 PTH1RQ03431 593 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 TFCP2Q12800 502 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 VPS53Q5VIR6 699 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 BOLA2Q9H3K6 86 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 ZSWIM6Q9HCJ5 1215 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 TLR7Q9NYK1 1049 aaKnown RBP15.9■□□□□ 0.14
SCRN1-207ENST00000434476 TMOD3Q9NYL9 352 aa15.9■□□□□ 0.14
SCRN1-207ENST00000434476 RFX7Q2KHR2 1363 aa15.89■□□□□ 0.14
SCRN1-207ENST00000434476 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
SCRN1-207ENST00000434476 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
SCRN1-207ENST00000434476 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
SCRN1-207ENST00000434476 ZSCAN31Q96LW9 406 aaPredicted RBP15.89■□□□□ 0.13
SCRN1-207ENST00000434476 FSD1Q9BTV5 496 aa15.89■□□□□ 0.13
SCRN1-207ENST00000434476 PSMA5P28066 241 aa15.88■□□□□ 0.13
SCRN1-207ENST00000434476 GRPEL1Q9HAV7 217 aa15.88■□□□□ 0.13
SCRN1-207ENST00000434476 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
SCRN1-207ENST00000434476 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
SCRN1-207ENST00000434476 AK2P54819 239 aa15.87■□□□□ 0.13
SCRN1-207ENST00000434476 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
SCRN1-207ENST00000434476 RNF20Q5VTR2 975 aa15.87■□□□□ 0.13
SCRN1-207ENST00000434476 PRPF40BQ6NWY9 871 aaKnown RBP15.87■□□□□ 0.13
SCRN1-207ENST00000434476 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
SCRN1-207ENST00000434476 WDR33Q9C0J8 1336 aaKnown RBP15.87■□□□□ 0.13
SCRN1-207ENST00000434476 DBNLQ9UJU6 430 aaKnown RBP15.87■□□□□ 0.13
SCRN1-207ENST00000434476 CIAO1O76071 339 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
SCRN1-207ENST00000434476 IL15P40933 162 aaPredicted RBP15.86■□□□□ 0.13
SCRN1-207ENST00000434476 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 RUFY3Q7L099 469 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 FAM227BQ96M60 508 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 HAUS7Q99871 368 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
SCRN1-207ENST00000434476 SH2B1Q9NRF2 756 aaPredicted RBP15.86■□□□□ 0.13
SCRN1-207ENST00000434476 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 RBM8AQ9Y5S9 174 aaKnown RBP15.86■□□□□ 0.13
SCRN1-207ENST00000434476 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
SCRN1-207ENST00000434476 MED23Q9ULK4 1368 aa15.85■□□□□ 0.13
SCRN1-207ENST00000434476 KCNJ4P48050 445 aa15.85■□□□□ 0.13
SCRN1-207ENST00000434476 TSGA10IPQ3SY00 556 aa15.85■□□□□ 0.13
SCRN1-207ENST00000434476 NOL8Q76FK4 1167 aaKnown RBP15.85■□□□□ 0.13
SCRN1-207ENST00000434476 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
SCRN1-207ENST00000434476 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
SCRN1-207ENST00000434476 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
SCRN1-207ENST00000434476 JCADQ9P266 1359 aa15.85■□□□□ 0.13
SCRN1-207ENST00000434476 PRPF40AO75400 957 aaKnown RBP15.84■□□□□ 0.13
SCRN1-207ENST00000434476 STARD3NLO95772 234 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
SCRN1-207ENST00000434476 ZNF445P59923 1031 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 ATG9AQ7Z3C6 839 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 BTG4Q9NY30 223 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 NUP188Q5SRE5 1749 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 A0A0D9SFI3 127 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 EYA2O00167 538 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 SLC27A2O14975 620 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 MBD3O95983 291 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 USPL1Q5W0Q7 1092 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 PIGBQ92521 554 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 ZBTB3Q9H5J0 574 aa15.84■□□□□ 0.13
SCRN1-207ENST00000434476 TAF5LO75529 589 aa15.83■□□□□ 0.12
SCRN1-207ENST00000434476 ANKRD1Q15327 319 aa15.83■□□□□ 0.12
SCRN1-207ENST00000434476 KIF6Q6ZMV9 814 aa15.83■□□□□ 0.12
SCRN1-207ENST00000434476 DBNDD2Q9BQY9 259 aa15.83■□□□□ 0.12
SCRN1-207ENST00000434476 PLA2G12BQ9BX93 195 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms