RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 ZNF496Q96IT1 587 aaPredicted RBP29.9■■■□□ 2.38
LMBR1-209ENST00000434453 ST3GAL1Q11201 340 aa29.9■■■□□ 2.38
LMBR1-209ENST00000434453 NMIQ13287 307 aaPredicted RBP29.9■■■□□ 2.38
LMBR1-209ENST00000434453 COPS6Q7L5N1 327 aa29.9■■■□□ 2.38
LMBR1-209ENST00000434453 SNRKQ9NRH2 765 aa29.9■■■□□ 2.38
LMBR1-209ENST00000434453 PDRG1Q9NUG6 133 aa29.9■■■□□ 2.38
LMBR1-209ENST00000434453 HS1BP3Q53T59 392 aa29.89■■■□□ 2.38
LMBR1-209ENST00000434453 CNPY2Q9Y2B0 182 aa29.89■■■□□ 2.38
LMBR1-209ENST00000434453 COL9A3Q14050 684 aaPredicted RBP29.88■■■□□ 2.37
LMBR1-209ENST00000434453 DDX17Q92841 729 aaKnown RBP29.88■■■□□ 2.37
LMBR1-209ENST00000434453 MAP4K1Q92918 833 aa29.88■■■□□ 2.37
LMBR1-209ENST00000434453 SMC3Q9UQE7 1217 aa29.88■■■□□ 2.37
LMBR1-209ENST00000434453 RBM8AQ9Y5S9 174 aaKnown RBP29.88■■■□□ 2.37
LMBR1-209ENST00000434453 METTL22Q9BUU2 404 aaPredicted RBP29.88■■■□□ 2.37
LMBR1-209ENST00000434453 DTNBO60941 627 aa29.87■■■□□ 2.37
LMBR1-209ENST00000434453 CCDC83Q8IWF9 413 aa29.87■■■□□ 2.37
LMBR1-209ENST00000434453 CYP46A1Q9Y6A2 500 aa29.87■■■□□ 2.37
LMBR1-209ENST00000434453 CREB3L3Q68CJ9 461 aa29.87■■■□□ 2.37
LMBR1-209ENST00000434453 DDX54Q8TDD1 881 aaKnown RBP29.87■■■□□ 2.37
LMBR1-209ENST00000434453 MYD88Q99836 296 aa29.87■■■□□ 2.37
LMBR1-209ENST00000434453 A0A0D9SFI3 127 aa29.86■■■□□ 2.37
LMBR1-209ENST00000434453 TATP17735 454 aaPredicted RBP29.86■■■□□ 2.37
LMBR1-209ENST00000434453 RNF214Q8ND24 703 aa29.86■■■□□ 2.37
LMBR1-209ENST00000434453 BOLA2Q9H3K6 86 aa29.86■■■□□ 2.37
LMBR1-209ENST00000434453 USP16Q9Y5T5 823 aa29.86■■■□□ 2.37
LMBR1-209ENST00000434453 AFDNP55196 1824 aaKnown RBP29.86■■■□□ 2.37
LMBR1-209ENST00000434453 F13A1P00488 732 aa29.86■■■□□ 2.37
LMBR1-209ENST00000434453 NEXNQ0ZGT2 675 aa29.86■■■□□ 2.37
LMBR1-209ENST00000434453 SYAP1Q96A49 352 aaPredicted RBP29.86■■■□□ 2.37
LMBR1-209ENST00000434453 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.86■■■□□ 2.37
LMBR1-209ENST00000434453 TSPY26PQ9H489 355 aa29.85■■■□□ 2.37
LMBR1-209ENST00000434453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.85■■■□□ 2.372e-7■□□□□ 9.4
LMBR1-209ENST00000434453 ABCC6O95255 1503 aa29.85■■■□□ 2.37
LMBR1-209ENST00000434453 HIP1O00291 1037 aa29.84■■■□□ 2.37
LMBR1-209ENST00000434453 PIP4K2AP48426 406 aaPredicted RBP29.84■■■□□ 2.37
LMBR1-209ENST00000434453 ME3Q16798 604 aa29.84■■■□□ 2.37
LMBR1-209ENST00000434453 GJB2P29033 226 aa29.83■■■□□ 2.37
LMBR1-209ENST00000434453 SH2B1Q9NRF2 756 aaPredicted RBP29.83■■■□□ 2.37
LMBR1-209ENST00000434453 MED23Q9ULK4 1368 aa29.83■■■□□ 2.37
LMBR1-209ENST00000434453 CYP27B1O15528 508 aa29.83■■■□□ 2.37
LMBR1-209ENST00000434453 IFNL2Q8IZJ0 200 aa29.83■■■□□ 2.37
LMBR1-209ENST00000434453 ZSCAN31Q96LW9 406 aaPredicted RBP29.83■■■□□ 2.37
LMBR1-209ENST00000434453 NOL7Q9UMY1 257 aaKnown RBP29.83■■■□□ 2.37
LMBR1-209ENST00000434453 ARFGEF2Q9Y6D5 1785 aa29.82■■■□□ 2.36
LMBR1-209ENST00000434453 SLC27A2O14975 620 aa29.82■■■□□ 2.36
LMBR1-209ENST00000434453 ANKRD13DQ6ZTN6 518 aa29.82■■■□□ 2.36
LMBR1-209ENST00000434453 JARID2Q92833 1246 aaPredicted RBP29.82■■■□□ 2.36
LMBR1-209ENST00000434453 PKD1L3Q7Z443 1732 aa29.82■■■□□ 2.36
LMBR1-209ENST00000434453 ZKSCAN1P17029 563 aaPredicted RBP29.81■■■□□ 2.36
LMBR1-209ENST00000434453 RFX5P48382 616 aaPredicted RBP29.81■■■□□ 2.36
LMBR1-209ENST00000434453 MTMR6Q9Y217 621 aa29.81■■■□□ 2.36
LMBR1-209ENST00000434453 GLI3P10071 1580 aa29.81■■■□□ 2.36
LMBR1-209ENST00000434453 TPCN1Q9ULQ1 816 aa29.81■■■□□ 2.36
LMBR1-209ENST00000434453 TAF6LQ9Y6J9 622 aa29.81■■■□□ 2.36
LMBR1-209ENST00000434453 CABLES1Q8TDN4 633 aa29.8■■■□□ 2.36
LMBR1-209ENST00000434453 FSD1Q9BTV5 496 aa29.8■■■□□ 2.36
LMBR1-209ENST00000434453 JCADQ9P266 1359 aa29.8■■■□□ 2.36
LMBR1-209ENST00000434453 SNRPA1P09661 255 aaKnown RBP29.8■■■□□ 2.36
LMBR1-209ENST00000434453 COPRSQ9NQ92 184 aa29.8■■■□□ 2.36
LMBR1-209ENST00000434453 ZNF589Q86UQ0 364 aaPredicted RBP29.79■■■□□ 2.36
LMBR1-209ENST00000434453 NECAB1Q8N987 351 aa29.79■■■□□ 2.36
LMBR1-209ENST00000434453 EDC3Q96F86 508 aaKnown RBP29.79■■■□□ 2.36
LMBR1-209ENST00000434453 STRCP1A6NGW2 1772 aa29.79■■■□□ 2.36
LMBR1-209ENST00000434453 PHF14O94880 888 aa29.79■■■□□ 2.36
LMBR1-209ENST00000434453 MSNP26038 577 aaKnown RBP29.79■■■□□ 2.36
LMBR1-209ENST00000434453 PTPN12Q05209 780 aaKnown RBP29.78■■■□□ 2.36
LMBR1-209ENST00000434453 DCAF5Q96JK2 942 aa29.78■■■□□ 2.36
LMBR1-209ENST00000434453 KCNJ4P48050 445 aa29.77■■■□□ 2.36
LMBR1-209ENST00000434453 UBE2HP62256 183 aa29.77■■■□□ 2.36
LMBR1-209ENST00000434453 DBNLQ9UJU6 430 aaKnown RBP29.77■■■□□ 2.36
LMBR1-209ENST00000434453 CHRNA2Q15822 529 aa29.77■■■□□ 2.36
LMBR1-209ENST00000434453 RABL6Q3YEC7 729 aaPredicted RBP29.76■■■□□ 2.36
LMBR1-209ENST00000434453 FIBPO43427 364 aa29.76■■■□□ 2.35
LMBR1-209ENST00000434453 CCDC183Q5T5S1 534 aa29.76■■■□□ 2.35
LMBR1-209ENST00000434453 CSB-PGBD3P0DP91 1061 aa29.75■■■□□ 2.35
LMBR1-209ENST00000434453 ATP6V1DQ9Y5K8 247 aa29.75■■■□□ 2.35
LMBR1-209ENST00000434453 COL15A1P39059 1388 aa29.75■■■□□ 2.35
LMBR1-209ENST00000434453 DNM1Q05193 864 aaKnown RBP29.75■■■□□ 2.35
LMBR1-209ENST00000434453 UBE3BQ7Z3V4 1068 aa29.75■■■□□ 2.35
LMBR1-209ENST00000434453 TTC5Q8N0Z6 440 aa29.75■■■□□ 2.35
LMBR1-209ENST00000434453 TMEM94Q12767 1356 aa29.75■■■□□ 2.35
LMBR1-209ENST00000434453 ATF3P18847 181 aa29.74■■■□□ 2.35
LMBR1-209ENST00000434453 FMNL2Q96PY5 1086 aa29.74■■■□□ 2.35
LMBR1-209ENST00000434453 LAMB4A4D0S4 1761 aa29.74■■■□□ 2.35
LMBR1-209ENST00000434453 OFD1O75665 1012 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 TFCP2Q12800 502 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 TNNI3KQ59H18 835 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 TCEANC2Q96MN5 208 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 FPGT-TNNI3KV9GXZ4 949 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 PLEKHG2Q9H7P9 1386 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 ZNF500O60304 480 aaPredicted RBP29.73■■■□□ 2.35
LMBR1-209ENST00000434453 ATP5JP18859 108 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 PSMA5P28066 241 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 CASP7P55210 303 aa29.73■■■□□ 2.35
LMBR1-209ENST00000434453 ATP5J2-PTCD1G3V325 749 aa29.72■■■□□ 2.35
LMBR1-209ENST00000434453 PTCD1O75127 700 aaKnown RBP29.72■■■□□ 2.35
LMBR1-209ENST00000434453 TAF5LO75529 589 aa29.72■■■□□ 2.35
LMBR1-209ENST00000434453 ZKSCAN5Q9Y2L8 839 aa29.72■■■□□ 2.35
LMBR1-209ENST00000434453 TPRNQ4KMQ1 711 aa29.71■■■□□ 2.35
LMBR1-209ENST00000434453 RPS6KB1P23443 525 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms