RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 C9orf78Q9NZ63 289 aaPredicted RBP29.23■■■□□ 2.27
SMARCAL1-208ENST00000434435 BICDL1Q6ZP65 573 aa29.22■■■□□ 2.27
SMARCAL1-208ENST00000434435 SETDB2Q96T68 719 aa29.22■■■□□ 2.27
SMARCAL1-208ENST00000434435 MEIS3Q99687 375 aa29.22■■■□□ 2.27
SMARCAL1-208ENST00000434435 GRM8O00222 908 aa29.21■■■□□ 2.27
SMARCAL1-208ENST00000434435 ZBTB7BO15156 539 aaPredicted RBP29.21■■■□□ 2.27
SMARCAL1-208ENST00000434435 NLGN1Q8N2Q7 840 aa29.21■■■□□ 2.27
SMARCAL1-208ENST00000434435 CARMIL3Q8ND23 1372 aa29.21■■■□□ 2.27
SMARCAL1-208ENST00000434435 GNAI3P08754 354 aa29.2■■■□□ 2.26
SMARCAL1-208ENST00000434435 PPP1R42Q7Z4L9 355 aa29.2■■■□□ 2.26
SMARCAL1-208ENST00000434435 USP44Q9H0E7 712 aa29.2■■■□□ 2.26
SMARCAL1-208ENST00000434435 DDX60Q8IY21 1712 aaKnown RBP29.2■■■□□ 2.26
SMARCAL1-208ENST00000434435 NFIXQ14938 502 aa29.19■■■□□ 2.26
SMARCAL1-208ENST00000434435 R3HDM1Q15032 1099 aaKnown RBP29.19■■■□□ 2.26
SMARCAL1-208ENST00000434435 NRXN2Q9P2S2 1712 aa29.19■■■□□ 2.26
SMARCAL1-208ENST00000434435 UTYO14607 1347 aa29.19■■■□□ 2.26
SMARCAL1-208ENST00000434435 UBTFL1P0CB47 393 aaPredicted RBP29.18■■■□□ 2.26
SMARCAL1-208ENST00000434435 AAMPQ13685 434 aa29.18■■■□□ 2.26
SMARCAL1-208ENST00000434435 SUSD4Q5VX71 490 aa29.18■■■□□ 2.26
SMARCAL1-208ENST00000434435 SLC16A10Q8TF71 515 aa29.18■■■□□ 2.26
SMARCAL1-208ENST00000434435 PCCAP05165 728 aaPredicted RBP29.17■■■□□ 2.26
SMARCAL1-208ENST00000434435 UTP14AQ9BVJ6 771 aaKnown RBP29.17■■■□□ 2.26
SMARCAL1-208ENST00000434435 TRMT112Q9UI30 125 aaKnown RBP29.17■■■□□ 2.26
SMARCAL1-208ENST00000434435 UBE3BQ7Z3V4 1068 aa29.16■■■□□ 2.26
SMARCAL1-208ENST00000434435 ZBTB38Q8NAP3 1195 aaPredicted RBP29.16■■■□□ 2.26
SMARCAL1-208ENST00000434435 PDGFDQ9GZP0 370 aaPredicted RBP29.16■■■□□ 2.26
SMARCAL1-208ENST00000434435 NYXQ9GZU5 481 aa29.16■■■□□ 2.26
SMARCAL1-208ENST00000434435 ZBTB40Q9NUA8 1239 aa29.16■■■□□ 2.26
SMARCAL1-208ENST00000434435 HDAC5Q9UQL6 1122 aa29.16■■■□□ 2.26
SMARCAL1-208ENST00000434435 FAM177BA6PVY3 158 aa29.15■■■□□ 2.26
SMARCAL1-208ENST00000434435 H7C1W4 665 aa29.15■■■□□ 2.26
SMARCAL1-208ENST00000434435 NTSR2O95665 410 aa29.15■■■□□ 2.26
SMARCAL1-208ENST00000434435 NBPF7P0C2Y1 421 aaPredicted RBP29.15■■■□□ 2.26
SMARCAL1-208ENST00000434435 TM4SF1P30408 202 aa29.15■■■□□ 2.26
SMARCAL1-208ENST00000434435 MSL1Q68DK7 614 aa29.15■■■□□ 2.26
SMARCAL1-208ENST00000434435 GNAI2P04899 355 aa29.13■■■□□ 2.25
SMARCAL1-208ENST00000434435 ERICH6BQ5W0A0 696 aa29.13■■■□□ 2.25
SMARCAL1-208ENST00000434435 NBPF5PQ86XG9 351 aaPredicted RBP29.13■■■□□ 2.25
SMARCAL1-208ENST00000434435 SH3TC1Q8TE82 1336 aa29.13■■■□□ 2.25
SMARCAL1-208ENST00000434435 CDHR2Q9BYE9 1310 aa29.13■■■□□ 2.25
SMARCAL1-208ENST00000434435 CASP7P55210 303 aa29.12■■■□□ 2.25
SMARCAL1-208ENST00000434435 RTL5Q5HYW3 569 aaPredicted RBP29.12■■■□□ 2.25
SMARCAL1-208ENST00000434435 JARID2Q92833 1246 aaPredicted RBP29.12■■■□□ 2.25
SMARCAL1-208ENST00000434435 FAM89AQ96GI7 184 aa29.12■■■□□ 2.25
SMARCAL1-208ENST00000434435 PSDA5PKW4 1024 aaPredicted RBP29.11■■■□□ 2.25
SMARCAL1-208ENST00000434435 DDR1Q08345 913 aa29.11■■■□□ 2.25
SMARCAL1-208ENST00000434435 POLRMTO00411 1230 aaKnown RBP29.1■■■□□ 2.25
SMARCAL1-208ENST00000434435 SOCS7O14512 581 aa29.1■■■□□ 2.25
SMARCAL1-208ENST00000434435 MMP10P09238 476 aa29.1■■■□□ 2.25
SMARCAL1-208ENST00000434435 TPTE2Q6XPS3 522 aa29.1■■■□□ 2.25
SMARCAL1-208ENST00000434435 C1orf115Q9H7X2 142 aa29.1■■■□□ 2.25
SMARCAL1-208ENST00000434435 LRRFIP2Q9Y608 721 aaKnown RBP29.1■■■□□ 2.25
SMARCAL1-208ENST00000434435 NPHP1O15259 732 aa29.09■■■□□ 2.25
SMARCAL1-208ENST00000434435 SERPINB2P05120 415 aa29.09■■■□□ 2.25
SMARCAL1-208ENST00000434435 GTF2E1P29083 439 aaPredicted RBP29.09■■■□□ 2.25
SMARCAL1-208ENST00000434435 SUCLG2Q96I99 432 aa29.09■■■□□ 2.25
SMARCAL1-208ENST00000434435 PARP3Q9Y6F1 533 aa29.09■■■□□ 2.25
SMARCAL1-208ENST00000434435 HSP90B1P14625 803 aaKnown RBP29.08■■■□□ 2.25
SMARCAL1-208ENST00000434435 NUTM1Q86Y26 1132 aa29.08■■■□□ 2.25
SMARCAL1-208ENST00000434435 CNBD1Q8NA66 436 aa29.08■■■□□ 2.25
SMARCAL1-208ENST00000434435 ANKRD31Q8N7Z5 1873 aa29.08■■■□□ 2.25
SMARCAL1-208ENST00000434435 IRS4O14654 1257 aaPredicted RBP29.07■■■□□ 2.24
SMARCAL1-208ENST00000434435 MTFR1LQ9H019 292 aa29.07■■■□□ 2.24
SMARCAL1-208ENST00000434435 TNRC6CQ9HCJ0 1690 aaKnown RBP29.07■■■□□ 2.24
SMARCAL1-208ENST00000434435 ABCC12Q96J65 1359 aa29.06■■■□□ 2.24
SMARCAL1-208ENST00000434435 SYNE4Q8N205 404 aa29.06■■■□□ 2.24
SMARCAL1-208ENST00000434435 ZBTB7AO95365 584 aa29.05■■■□□ 2.24
SMARCAL1-208ENST00000434435 ERFEQ4G0M1 354 aa29.05■■■□□ 2.24
SMARCAL1-208ENST00000434435 PLA2G12BQ9BX93 195 aa29.05■■■□□ 2.24
SMARCAL1-208ENST00000434435 RIC1Q4ADV7 1423 aa29.04■■■□□ 2.24
SMARCAL1-208ENST00000434435 PDE8AO60658 829 aa29.04■■■□□ 2.24
SMARCAL1-208ENST00000434435 ST5P78524 1137 aa29.04■■■□□ 2.24
SMARCAL1-208ENST00000434435 PRR5LQ6MZQ0 368 aa29.04■■■□□ 2.24
SMARCAL1-208ENST00000434435 BICC1Q9H694 974 aaKnown RBP29.04■■■□□ 2.24
SMARCAL1-208ENST00000434435 KAZALD1Q96I82 304 aa29.03■■■□□ 2.24
SMARCAL1-208ENST00000434435 HCLS1P14317 486 aaPredicted RBP29.02■■■□□ 2.24
SMARCAL1-208ENST00000434435 EPHA10Q5JZY3 1008 aa29.01■■■□□ 2.23
SMARCAL1-208ENST00000434435 SLC10A5Q5PT55 438 aa29.01■■■□□ 2.23
SMARCAL1-208ENST00000434435 CEP85Q6P2H3 762 aa29.01■■■□□ 2.23
SMARCAL1-208ENST00000434435 PCDHB15Q9Y5E8 787 aa29.01■■■□□ 2.23
SMARCAL1-208ENST00000434435 KIF13BQ9NQT8 1826 aa29■■■□□ 2.23
SMARCAL1-208ENST00000434435 FOXO4P98177 505 aa29■■■□□ 2.23
SMARCAL1-208ENST00000434435 RABL6Q3YEC7 729 aaPredicted RBP29■■■□□ 2.23
SMARCAL1-208ENST00000434435 RPAP2Q8IXW5 612 aaPredicted RBP29■■■□□ 2.23
SMARCAL1-208ENST00000434435 ANKRD44Q8N8A2 993 aa29■■■□□ 2.23
SMARCAL1-208ENST00000434435 POLD1P28340 1107 aa28.99■■■□□ 2.23
SMARCAL1-208ENST00000434435 CTSWP56202 376 aa28.99■■■□□ 2.23
SMARCAL1-208ENST00000434435 GTF3C3Q9Y5Q9 886 aa28.99■■■□□ 2.23
SMARCAL1-208ENST00000434435 MTX1Q13505 466 aa28.98■■■□□ 2.23
SMARCAL1-208ENST00000434435 CCDC24Q8N4L8 307 aa28.98■■■□□ 2.23
SMARCAL1-208ENST00000434435 ATF5Q9Y2D1 282 aaPredicted RBP28.98■■■□□ 2.23
SMARCAL1-208ENST00000434435 SPEF2Q9C093 1822 aa28.98■■■□□ 2.23
SMARCAL1-208ENST00000434435 LMBR1LQ6UX01 489 aa28.97■■■□□ 2.23
SMARCAL1-208ENST00000434435 ATP8B2P98198 1209 aa28.96■■■□□ 2.23
SMARCAL1-208ENST00000434435 NLRP3Q96P20 1036 aa28.96■■■□□ 2.23
SMARCAL1-208ENST00000434435 PPP4R2Q9NY27 417 aa28.96■■■□□ 2.23
SMARCAL1-208ENST00000434435 CHMP3Q9Y3E7 222 aa28.96■■■□□ 2.23
SMARCAL1-208ENST00000434435 COL11A2P13942 1736 aaPredicted RBP28.96■■■□□ 2.23
SMARCAL1-208ENST00000434435 HMMRO75330 724 aa28.95■■■□□ 2.22
SMARCAL1-208ENST00000434435 SRGAP3O43295 1099 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms