RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
HDAC9-213ENST00000433709 IDH3AP50213 366 aa9.99□□□□□ -0.81
HDAC9-213ENST00000433709 TREML1Q86YW5 311 aa9.99□□□□□ -0.81
HDAC9-213ENST00000433709 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
HDAC9-213ENST00000433709 STIM2Q9P246 746 aa9.99□□□□□ -0.81
HDAC9-213ENST00000433709 CUX2O14529 1486 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 C2CD2LO14523 706 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 ZBTB39O15060 712 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 PDIA4P13667 645 aaKnown RBP9.98□□□□□ -0.81
HDAC9-213ENST00000433709 INPP5BP32019 993 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 SERPINB4P48594 390 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 TXNDC2Q86VQ3 553 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 HELQQ8TDG4 1101 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 MARK1Q9P0L2 795 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
HDAC9-213ENST00000433709 OPLAHO14841 1288 aa9.97□□□□□ -0.81
HDAC9-213ENST00000433709 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-213ENST00000433709 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
HDAC9-213ENST00000433709 WIPF1O43516 503 aa9.96□□□□□ -0.82
HDAC9-213ENST00000433709 BMP4P12644 408 aa9.96□□□□□ -0.82
HDAC9-213ENST00000433709 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
HDAC9-213ENST00000433709 LAMC2Q13753 1193 aa9.96□□□□□ -0.82
HDAC9-213ENST00000433709 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.82
HDAC9-213ENST00000433709 IGF1RP08069 1367 aa9.96□□□□□ -0.82
HDAC9-213ENST00000433709 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
HDAC9-213ENST00000433709 SRSF11Q05519 484 aaKnown RBP9.95□□□□□ -0.82
HDAC9-213ENST00000433709 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
HDAC9-213ENST00000433709 MPSTP25325 297 aa9.94□□□□□ -0.82
HDAC9-213ENST00000433709 ARSDP51689 593 aa9.94□□□□□ -0.82
HDAC9-213ENST00000433709 KCNQ4P56696 695 aa9.94□□□□□ -0.82
HDAC9-213ENST00000433709 LAMC3Q9Y6N6 1575 aa9.93□□□□□ -0.82
HDAC9-213ENST00000433709 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC9-213ENST00000433709 FAM182BQ5T319 152 aa9.93□□□□□ -0.82
HDAC9-213ENST00000433709 ATCAYQ86WG3 371 aa9.93□□□□□ -0.82
HDAC9-213ENST00000433709 SLC30A3Q99726 388 aa9.93□□□□□ -0.82
HDAC9-213ENST00000433709 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
HDAC9-213ENST00000433709 SLURP2P0DP57 97 aa9.92□□□□□ -0.82
HDAC9-213ENST00000433709 ZAP70P43403 619 aa9.92□□□□□ -0.82
HDAC9-213ENST00000433709 RGL4Q8IZJ4 473 aa9.92□□□□□ -0.82
HDAC9-213ENST00000433709 ABTB2Q8N961 1025 aa9.92□□□□□ -0.82
HDAC9-213ENST00000433709 CCER1Q8TC90 406 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-213ENST00000433709 NSFL1CQ9UNZ2 370 aaKnown RBP9.92□□□□□ -0.82
HDAC9-213ENST00000433709 RTCBQ9Y3I0 505 aaKnown RBP9.92□□□□□ -0.82
HDAC9-213ENST00000433709 ICMTO60725 284 aa9.91□□□□□ -0.82
HDAC9-213ENST00000433709 MAP2K3P46734 347 aa9.91□□□□□ -0.82
HDAC9-213ENST00000433709 SPEM2Q0P670 501 aa9.91□□□□□ -0.82
HDAC9-213ENST00000433709 RAB44Q7Z6P3 723 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-213ENST00000433709 WHAMMQ8TF30 809 aa9.91□□□□□ -0.82
HDAC9-213ENST00000433709 EGFL7Q9UHF1 273 aa9.91□□□□□ -0.82
HDAC9-213ENST00000433709 EPB42P16452 691 aa9.9□□□□□ -0.82
HDAC9-213ENST00000433709 NPR3P17342 541 aa9.9□□□□□ -0.82
HDAC9-213ENST00000433709 EIF1AXP47813 144 aaKnown RBP9.9□□□□□ -0.82
HDAC9-213ENST00000433709 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
HDAC9-213ENST00000433709 NOM1Q5C9Z4 860 aaKnown RBP9.9□□□□□ -0.82
HDAC9-213ENST00000433709 CMTR1Q8N1G2 835 aaKnown RBP9.9□□□□□ -0.82
HDAC9-213ENST00000433709 GPR152Q8TDT2 470 aa9.9□□□□□ -0.82
HDAC9-213ENST00000433709 ACDQ96AP0 544 aa9.9□□□□□ -0.82
HDAC9-213ENST00000433709 PRR12Q9ULL5 1215 aa9.9□□□□□ -0.82
HDAC9-213ENST00000433709 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.82
HDAC9-213ENST00000433709 H3BRB1 525 aa9.89□□□□□ -0.83
HDAC9-213ENST00000433709 FAM13AO94988 1023 aa9.89□□□□□ -0.83
HDAC9-213ENST00000433709 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-213ENST00000433709 PCBP4P57723 403 aaKnown RBP9.89□□□□□ -0.83
HDAC9-213ENST00000433709 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
HDAC9-213ENST00000433709 GSX2Q9BZM3 304 aa9.89□□□□□ -0.83
HDAC9-213ENST00000433709 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
HDAC9-213ENST00000433709 KLF15Q9UIH9 416 aa9.89□□□□□ -0.83
HDAC9-213ENST00000433709 KCNA1Q09470 495 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 ECM1Q16610 540 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 LYPD4Q6UWN0 246 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 OXCT2Q9BYC2 517 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-213ENST00000433709 KCNMB2Q9Y691 235 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 IVNS1ABPQ9Y6Y0 642 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
HDAC9-213ENST00000433709 CCINQ13939 588 aa9.87□□□□□ -0.83
HDAC9-213ENST00000433709 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
HDAC9-213ENST00000433709 PIK3R5Q8WYR1 880 aa9.87□□□□□ -0.83
HDAC9-213ENST00000433709 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
HDAC9-213ENST00000433709 NEURL1BA8MQ27 555 aa9.86□□□□□ -0.83
HDAC9-213ENST00000433709 ARAFP10398 606 aa9.86□□□□□ -0.83
HDAC9-213ENST00000433709 AAMPQ13685 434 aa9.86□□□□□ -0.83
HDAC9-213ENST00000433709 TRIP4Q15650 581 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-213ENST00000433709 ZNF468Q5VIY5 522 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-213ENST00000433709 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
HDAC9-213ENST00000433709 EDEM1Q92611 657 aa9.86□□□□□ -0.83
HDAC9-213ENST00000433709 BHMTQ93088 406 aa9.86□□□□□ -0.83
HDAC9-213ENST00000433709 SOWAHDA6NJG2 315 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 XYLBO75191 536 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 SASH3O75995 380 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
HDAC9-213ENST00000433709 ZNF385CQ66K41 422 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-213ENST00000433709 ALKBH2Q6NS38 261 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 C1orf229Q6ZS94 237 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-213ENST00000433709 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 ZSCAN1Q8NBB4 408 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
HDAC9-213ENST00000433709 CELA2BP08218 269 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-213ENST00000433709 NFKB1P19838 968 aa9.84□□□□□ -0.83
HDAC9-213ENST00000433709 TARSP26639 723 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms