RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 OXCT2Q9BYC2 517 aaPredicted RBP6.5□□□□□ -1.37
LINC01239-201ENST00000433645 FAM181BA6NEQ2 426 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 EGFRP00533 1210 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 CD33P20138 364 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 SFSWAPQ12872 951 aaKnown RBP6.49□□□□□ -1.37
LINC01239-201ENST00000433645 NAA30Q147X3 362 aaPredicted RBP6.49□□□□□ -1.37
LINC01239-201ENST00000433645 SLCO4C1Q6ZQN7 724 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 TREML1Q86YW5 311 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 TRAIPQ9BWF2 469 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 STRN4Q9NRL3 753 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 SEPT3Q9UH03 358 aa6.49□□□□□ -1.37
LINC01239-201ENST00000433645 CARNS1A5YM72 827 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 OPLAHO14841 1288 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 SIN3BO75182 1162 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 BCRP11274 1271 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 ADH6P28332 368 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 TXNDC2Q86VQ3 553 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 ETFBKMTQ8IXQ9 262 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 GTF3C2Q8WUA4 911 aaPredicted RBP6.48□□□□□ -1.37
LINC01239-201ENST00000433645 ACDQ96AP0 544 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 ENAMQ9NRM1 1142 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 STK17AQ9UEE5 414 aa6.48□□□□□ -1.37
LINC01239-201ENST00000433645 CELA2BP08218 269 aaPredicted RBP6.47□□□□□ -1.37
LINC01239-201ENST00000433645 MAP3K10Q02779 954 aa6.47□□□□□ -1.37
LINC01239-201ENST00000433645 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC01239-201ENST00000433645 SPEM2Q0P670 501 aa6.47□□□□□ -1.37
LINC01239-201ENST00000433645 ZNF385CQ66K41 422 aaPredicted RBP6.47□□□□□ -1.37
LINC01239-201ENST00000433645 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
LINC01239-201ENST00000433645 PRR12Q9ULL5 1215 aa6.47□□□□□ -1.37
LINC01239-201ENST00000433645 GNEQ9Y223 722 aaKnown RBP6.47□□□□□ -1.37
LINC01239-201ENST00000433645 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
LINC01239-201ENST00000433645 OIP5O43482 229 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 FAM13AO94988 1023 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 ARHGEF15O94989 841 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 RPLP1P05386 114 aaKnown RBP6.46□□□□□ -1.38
LINC01239-201ENST00000433645 CCINQ13939 588 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 LYPD4Q6UWN0 246 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 CCER1Q8TC90 406 aaPredicted RBP6.46□□□□□ -1.38
LINC01239-201ENST00000433645 TNFRSF25Q93038 417 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 GSX2Q9BZM3 304 aa6.46□□□□□ -1.38
LINC01239-201ENST00000433645 ADARB2-AS1A8MUL3 147 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 MAP3K6O95382 1288 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
LINC01239-201ENST00000433645 ZAP70P43403 619 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 SVOPQ8N4V2 548 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 PIK3R5Q8WYR1 880 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 SLC30A3Q99726 388 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 MDFIQ99750 246 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 GGA1Q9UJY5 639 aa6.45□□□□□ -1.38
LINC01239-201ENST00000433645 RTCBQ9Y3I0 505 aaKnown RBP6.45□□□□□ -1.38
LINC01239-201ENST00000433645 DNMT3AQ9Y6K1 912 aaPredicted RBP6.45□□□□□ -1.38
LINC01239-201ENST00000433645 ICMTO60725 284 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 EPXP11678 715 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 KCNA1Q09470 495 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 NOM1Q5C9Z4 860 aaKnown RBP6.44□□□□□ -1.38
LINC01239-201ENST00000433645 FAM26DQ5JW98 314 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 SYT9Q86SS6 491 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 EDARADDQ8WWZ3 215 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 KLF15Q9UIH9 416 aa6.44□□□□□ -1.38
LINC01239-201ENST00000433645 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
LINC01239-201ENST00000433645 ELOA3CA0A087WX78 387 aaPredicted RBP6.43□□□□□ -1.38
LINC01239-201ENST00000433645 ELOA3DA6NLF2 546 aaPredicted RBP6.43□□□□□ -1.38
LINC01239-201ENST00000433645 SCNN1AP37088 669 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 PCSK7Q16549 785 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 ELOA3BQ3SY89 546 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 GALNT6Q8NCL4 622 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 ELOA3Q8NG57 546 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 WHAMMQ8TF30 809 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
LINC01239-201ENST00000433645 NEURL1BA8MQ27 555 aa6.42□□□□□ -1.38
LINC01239-201ENST00000433645 ZBTB39O15060 712 aa6.42□□□□□ -1.38
LINC01239-201ENST00000433645 FCHSD1Q86WN1 690 aa6.42□□□□□ -1.38
LINC01239-201ENST00000433645 RGL4Q8IZJ4 473 aa6.42□□□□□ -1.38
LINC01239-201ENST00000433645 PNMA5Q96PV4 448 aa6.42□□□□□ -1.38
LINC01239-201ENST00000433645 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
LINC01239-201ENST00000433645 XYLBO75191 536 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 HOXD8P13378 290 aaPredicted RBP6.41□□□□□ -1.38
LINC01239-201ENST00000433645 PCSK2P16519 638 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 ALAS2P22557 587 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 MPSTP25325 297 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 MZF1P28698 734 aaPredicted RBP6.41□□□□□ -1.38
LINC01239-201ENST00000433645 USP5P45974 858 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 EIF1AXP47813 144 aaKnown RBP6.41□□□□□ -1.38
LINC01239-201ENST00000433645 PCBP4P57723 403 aaKnown RBP6.41□□□□□ -1.38
LINC01239-201ENST00000433645 GRIN2CQ14957 1233 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 PDE12Q6L8Q7 609 aaKnown RBP6.41□□□□□ -1.38
LINC01239-201ENST00000433645 KANK3Q6NY19 840 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 XKR5Q6UX68 686 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
LINC01239-201ENST00000433645 BHMTQ93088 406 aa6.41□□□□□ -1.38
LINC01239-201ENST00000433645 ABL1P00519 1130 aa6.4□□□□□ -1.38
LINC01239-201ENST00000433645 PDIA4P13667 645 aaKnown RBP6.4□□□□□ -1.38
LINC01239-201ENST00000433645 SOX18P35713 384 aa6.4□□□□□ -1.38
LINC01239-201ENST00000433645 NLRP13Q86W25 1043 aa6.4□□□□□ -1.38
LINC01239-201ENST00000433645 CMTR1Q8N1G2 835 aaKnown RBP6.4□□□□□ -1.38
LINC01239-201ENST00000433645 BTBD6Q96KE9 485 aa6.4□□□□□ -1.38
LINC01239-201ENST00000433645 ADAMTS8Q9UP79 889 aa6.4□□□□□ -1.38
LINC01239-201ENST00000433645 PIK3R2O00459 728 aa6.39□□□□□ -1.39
LINC01239-201ENST00000433645 NFKB1P19838 968 aa6.39□□□□□ -1.39
LINC01239-201ENST00000433645 SERPINB4P48594 390 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms