RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 ERVV-2B6SEH9 535 aa16.58■□□□□ 0.24
LSM14A-201ENST00000433627 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
LSM14A-201ENST00000433627 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
LSM14A-201ENST00000433627 MCM2P49736 904 aa16.57■□□□□ 0.24
LSM14A-201ENST00000433627 CRYBG1Q9Y4K1 1723 aa16.57■□□□□ 0.24
LSM14A-201ENST00000433627 NMIQ13287 307 aaPredicted RBP16.57■□□□□ 0.24
LSM14A-201ENST00000433627 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
LSM14A-201ENST00000433627 NEUROD6Q96NK8 337 aa16.57■□□□□ 0.24
LSM14A-201ENST00000433627 CASTP20810 708 aaKnown RBP16.56■□□□□ 0.24
LSM14A-201ENST00000433627 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
LSM14A-201ENST00000433627 TPRNQ4KMQ1 711 aa16.56■□□□□ 0.24
LSM14A-201ENST00000433627 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
LSM14A-201ENST00000433627 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
LSM14A-201ENST00000433627 ASAP1Q9ULH1 1129 aa16.56■□□□□ 0.24
LSM14A-201ENST00000433627 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
LSM14A-201ENST00000433627 STRCQ7RTU9 1775 aa16.55■□□□□ 0.24
LSM14A-201ENST00000433627 MRC1P22897 1456 aa16.55■□□□□ 0.24
LSM14A-201ENST00000433627 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
LSM14A-201ENST00000433627 PANK2Q9BZ23 570 aa16.55■□□□□ 0.24
LSM14A-201ENST00000433627 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
LSM14A-201ENST00000433627 DBNDD2Q9BQY9 259 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 DBNLQ9UJU6 430 aaKnown RBP16.54■□□□□ 0.24
LSM14A-201ENST00000433627 TNNI3KQ59H18 835 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
LSM14A-201ENST00000433627 ZDHHC9Q9Y397 364 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 FPGT-TNNI3KV9GXZ4 949 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
LSM14A-201ENST00000433627 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
LSM14A-201ENST00000433627 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
LSM14A-201ENST00000433627 AK2P54819 239 aa16.53■□□□□ 0.24
LSM14A-201ENST00000433627 PTMSP20962 102 aa16.52■□□□□ 0.24
LSM14A-201ENST00000433627 ADCK5Q3MIX3 580 aa16.52■□□□□ 0.24
LSM14A-201ENST00000433627 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
LSM14A-201ENST00000433627 CHGBP05060 677 aa16.52■□□□□ 0.23
LSM14A-201ENST00000433627 CYP2E1P05181 493 aaPredicted RBP16.52■□□□□ 0.23
LSM14A-201ENST00000433627 CCDC171Q6TFL3 1326 aa16.52■□□□□ 0.23
LSM14A-201ENST00000433627 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.23
LSM14A-201ENST00000433627 PIGBQ92521 554 aa16.52■□□□□ 0.23
LSM14A-201ENST00000433627 ABCC6O95255 1503 aa16.51■□□□□ 0.23
LSM14A-201ENST00000433627 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
LSM14A-201ENST00000433627 ADAMTS2O95450 1211 aa16.51■□□□□ 0.23
LSM14A-201ENST00000433627 ZKSCAN1P17029 563 aaPredicted RBP16.51■□□□□ 0.23
LSM14A-201ENST00000433627 TCEANC2Q96MN5 208 aa16.51■□□□□ 0.23
LSM14A-201ENST00000433627 AFDNP55196 1824 aaKnown RBP16.51■□□□□ 0.23
LSM14A-201ENST00000433627 GPTP24298 496 aa16.51■□□□□ 0.23
LSM14A-201ENST00000433627 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
LSM14A-201ENST00000433627 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
LSM14A-201ENST00000433627 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 HIP1O00291 1037 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 CASP7P55210 303 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 TIMM10P62072 90 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 FOXO4P98177 505 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 CUL4AQ13619 759 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
LSM14A-201ENST00000433627 H7C1W4 665 aa16.5■□□□□ 0.23
LSM14A-201ENST00000433627 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
LSM14A-201ENST00000433627 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 CREB3L3Q68CJ9 461 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 GAS2L3Q86XJ1 694 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
LSM14A-201ENST00000433627 FSD2A1L4K1 749 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 GDPD2Q9HCC8 539 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
LSM14A-201ENST00000433627 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
LSM14A-201ENST00000433627 RBM27Q9P2N5 1060 aaKnown RBP16.48■□□□□ 0.23
LSM14A-201ENST00000433627 ARFGEF2Q9Y6D5 1785 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
LSM14A-201ENST00000433627 LARGE1O95461 756 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
LSM14A-201ENST00000433627 STARD3NLO95772 234 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 INTS4Q96HW7 963 aaKnown RBP16.47■□□□□ 0.23
LSM14A-201ENST00000433627 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 SMC3Q9UQE7 1217 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 GOLIM4O00461 696 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 ATP5JP18859 108 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 MRE11P49959 708 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 TTC14Q96N46 770 aa16.47■□□□□ 0.23
LSM14A-201ENST00000433627 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
LSM14A-201ENST00000433627 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
LSM14A-201ENST00000433627 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
LSM14A-201ENST00000433627 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
LSM14A-201ENST00000433627 NECAB1Q8N987 351 aa16.46■□□□□ 0.23
LSM14A-201ENST00000433627 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
LSM14A-201ENST00000433627 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
LSM14A-201ENST00000433627 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms