RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 BCL2L12Q9HB09 334 aa33.21■■■□□ 2.91
TMEM248-205ENST00000433271 B4GALNT3Q6L9W6 998 aa33.2■■■□□ 2.9
TMEM248-205ENST00000433271 H7C1W4 665 aa33.19■■■□□ 2.9
TMEM248-205ENST00000433271 STK32BQ9NY57 414 aa33.19■■■□□ 2.9
TMEM248-205ENST00000433271 SLC15A2Q16348 729 aa33.18■■■□□ 2.9
TMEM248-205ENST00000433271 ANO8Q9HCE9 1232 aaPredicted RBP33.18■■■□□ 2.9
TMEM248-205ENST00000433271 NIP7Q9Y221 180 aaKnown RBP eCLIP33.18■■■□□ 2.9
TMEM248-205ENST00000433271 UBN2Q6ZU65 1347 aa33.18■■■□□ 2.9
TMEM248-205ENST00000433271 PARP10Q53GL7 1025 aa33.17■■■□□ 2.9
TMEM248-205ENST00000433271 LRRFIP2Q9Y608 721 aaKnown RBP33.17■■■□□ 2.9
TMEM248-205ENST00000433271 UBE3BQ7Z3V4 1068 aa33.17■■■□□ 2.9
TMEM248-205ENST00000433271 CASP7P55210 303 aa33.16■■■□□ 2.9
TMEM248-205ENST00000433271 COL23A1Q86Y22 540 aaPredicted RBP33.15■■■□□ 2.9
TMEM248-205ENST00000433271 RPAP2Q8IXW5 612 aaPredicted RBP33.15■■■□□ 2.9
TMEM248-205ENST00000433271 ZBTB38Q8NAP3 1195 aaPredicted RBP33.15■■■□□ 2.9
TMEM248-205ENST00000433271 PCCAP05165 728 aaPredicted RBP33.14■■■□□ 2.9
TMEM248-205ENST00000433271 TBC1D9BQ66K14 1250 aa33.14■■■□□ 2.9
TMEM248-205ENST00000433271 TUBGCP6Q96RT7 1819 aa33.14■■■□□ 2.9
TMEM248-205ENST00000433271 CEP85Q6P2H3 762 aa33.13■■■□□ 2.89
TMEM248-205ENST00000433271 PNPLA7Q6ZV29 1317 aa33.13■■■□□ 2.89
TMEM248-205ENST00000433271 GYS1P13807 737 aa33.13■■■□□ 2.89
TMEM248-205ENST00000433271 ANKRD44Q8N8A2 993 aa33.13■■■□□ 2.89
TMEM248-205ENST00000433271 JARID2Q92833 1246 aaPredicted RBP33.13■■■□□ 2.89
TMEM248-205ENST00000433271 SUCLG2Q96I99 432 aa33.13■■■□□ 2.89
TMEM248-205ENST00000433271 HDAC1Q13547 482 aaPredicted RBP33.12■■■□□ 2.89
TMEM248-205ENST00000433271 SUSD4Q5VX71 490 aa33.12■■■□□ 2.89
TMEM248-205ENST00000433271 RWDD1Q9H446 243 aaPredicted RBP33.12■■■□□ 2.89
TMEM248-205ENST00000433271 PPP1R42Q7Z4L9 355 aa33.11■■■□□ 2.89
TMEM248-205ENST00000433271 SIRT2Q8IXJ6 389 aa33.11■■■□□ 2.89
TMEM248-205ENST00000433271 SETDB2Q96T68 719 aa33.11■■■□□ 2.89
TMEM248-205ENST00000433271 TRMT112Q9UI30 125 aaKnown RBP33.11■■■□□ 2.89
TMEM248-205ENST00000433271 FAM89AQ96GI7 184 aa33.1■■■□□ 2.89
TMEM248-205ENST00000433271 KAZALD1Q96I82 304 aa33.1■■■□□ 2.89
TMEM248-205ENST00000433271 UTP14AQ9BVJ6 771 aaKnown RBP33.1■■■□□ 2.89
TMEM248-205ENST00000433271 RTL5Q5HYW3 569 aaPredicted RBP33.1■■■□□ 2.89
TMEM248-205ENST00000433271 BICDL1Q6ZP65 573 aa33.1■■■□□ 2.89
TMEM248-205ENST00000433271 MSH5O43196 834 aa33.09■■■□□ 2.89
TMEM248-205ENST00000433271 IGHDP01880 384 aa33.09■■■□□ 2.89
TMEM248-205ENST00000433271 ATP8B2P98198 1209 aa33.08■■■□□ 2.89
TMEM248-205ENST00000433271 CDHR2Q9BYE9 1310 aa33.07■■■□□ 2.88
TMEM248-205ENST00000433271 NTSR2O95665 410 aa33.06■■■□□ 2.88
TMEM248-205ENST00000433271 BICC1Q9H694 974 aaKnown RBP33.06■■■□□ 2.88
TMEM248-205ENST00000433271 QSER1Q2KHR3 1735 aa33.06■■■□□ 2.88
TMEM248-205ENST00000433271 MTX1Q13505 466 aa33.06■■■□□ 2.88
TMEM248-205ENST00000433271 ILDR2Q71H61 639 aa33.06■■■□□ 2.88
TMEM248-205ENST00000433271 SH3TC1Q8TE82 1336 aa33.05■■■□□ 2.88
TMEM248-205ENST00000433271 NFIXQ14938 502 aa33.05■■■□□ 2.88
TMEM248-205ENST00000433271 KDM2BQ8NHM5 1336 aa33.05■■■□□ 2.88
TMEM248-205ENST00000433271 FAM177BA6PVY3 158 aa33.04■■■□□ 2.88
TMEM248-205ENST00000433271 HMMRO75330 724 aa33.04■■■□□ 2.88
TMEM248-205ENST00000433271 EPHA10Q5JZY3 1008 aa33.04■■■□□ 2.88
TMEM248-205ENST00000433271 NLGN1Q8N2Q7 840 aa33.04■■■□□ 2.88
TMEM248-205ENST00000433271 PLA2G12BQ9BX93 195 aa33.04■■■□□ 2.88
TMEM248-205ENST00000433271 CENPQQ7L2Z9 268 aaPredicted RBP33.03■■■□□ 2.88
TMEM248-205ENST00000433271 SYNE4Q8N205 404 aa33.03■■■□□ 2.88
TMEM248-205ENST00000433271 NYXQ9GZU5 481 aa33.03■■■□□ 2.88
TMEM248-205ENST00000433271 TM4SF1P30408 202 aa33.02■■■□□ 2.88
TMEM248-205ENST00000433271 RABL6Q3YEC7 729 aaPredicted RBP33.02■■■□□ 2.88
TMEM248-205ENST00000433271 CARMIL3Q8ND23 1372 aa33.02■■■□□ 2.88
TMEM248-205ENST00000433271 PNMA6EA0A0J9YXQ4 647 aa33.02■■■□□ 2.88
TMEM248-205ENST00000433271 IRS4O14654 1257 aaPredicted RBP33.02■■■□□ 2.88
TMEM248-205ENST00000433271 FOXO4P98177 505 aa33.02■■■□□ 2.88
TMEM248-205ENST00000433271 COL24A1Q17RW2 1714 aa33.02■■■□□ 2.88
TMEM248-205ENST00000433271 SRGAP3O43295 1099 aa33■■■□□ 2.87
TMEM248-205ENST00000433271 HSP90B1P14625 803 aaKnown RBP33■■■□□ 2.87
TMEM248-205ENST00000433271 TPTE2Q6XPS3 522 aa33■■■□□ 2.87
TMEM248-205ENST00000433271 NBPF5PQ86XG9 351 aaPredicted RBP33■■■□□ 2.87
TMEM248-205ENST00000433271 SSH3Q8TE77 659 aa33■■■□□ 2.87
TMEM248-205ENST00000433271 POLA2Q14181 598 aa32.99■■■□□ 2.87
TMEM248-205ENST00000433271 NUTM1Q86Y26 1132 aa32.98■■■□□ 2.87
TMEM248-205ENST00000433271 LMBR1LQ6UX01 489 aa32.97■■■□□ 2.87
TMEM248-205ENST00000433271 PDE8AO60658 829 aa32.96■■■□□ 2.87
TMEM248-205ENST00000433271 GTF2E1P29083 439 aaPredicted RBP32.96■■■□□ 2.87
TMEM248-205ENST00000433271 ERFEQ4G0M1 354 aa32.95■■■□□ 2.87
TMEM248-205ENST00000433271 DCTPP1Q9H773 170 aa32.95■■■□□ 2.87
TMEM248-205ENST00000433271 SLC10A5Q5PT55 438 aa32.95■■■□□ 2.86
TMEM248-205ENST00000433271 SMC5Q8IY18 1101 aa32.95■■■□□ 2.86
TMEM248-205ENST00000433271 CSF1RP07333 972 aa32.94■■■□□ 2.86
TMEM248-205ENST00000433271 HCLS1P14317 486 aaPredicted RBP32.94■■■□□ 2.86
TMEM248-205ENST00000433271 GCC1Q96CN9 775 aa32.94■■■□□ 2.86
TMEM248-205ENST00000433271 DDR1Q08345 913 aa32.93■■■□□ 2.86
TMEM248-205ENST00000433271 POLRMTO00411 1230 aaKnown RBP32.92■■■□□ 2.86
TMEM248-205ENST00000433271 SERPINB2P05120 415 aa32.92■■■□□ 2.86
TMEM248-205ENST00000433271 CTSWP56202 376 aa32.92■■■□□ 2.86
TMEM248-205ENST00000433271 CNBD1Q8NA66 436 aa32.91■■■□□ 2.86
TMEM248-205ENST00000433271 TTLL11Q8NHH1 800 aa32.91■■■□□ 2.86
TMEM248-205ENST00000433271 SLC16A10Q8TF71 515 aa32.91■■■□□ 2.86
TMEM248-205ENST00000433271 NPHP1O15259 732 aa32.9■■■□□ 2.86
TMEM248-205ENST00000433271 PDGFDQ9GZP0 370 aaPredicted RBP32.9■■■□□ 2.86
TMEM248-205ENST00000433271 CHMP3Q9Y3E7 222 aa32.9■■■□□ 2.86
TMEM248-205ENST00000433271 MSL1Q68DK7 614 aa32.89■■■□□ 2.86
TMEM248-205ENST00000433271 DDX60Q8IY21 1712 aaKnown RBP32.89■■■□□ 2.86
TMEM248-205ENST00000433271 MMP10P09238 476 aa32.88■■■□□ 2.85
TMEM248-205ENST00000433271 LAMB2P55268 1798 aa32.88■■■□□ 2.85
TMEM248-205ENST00000433271 MYH3P11055 1940 aa32.88■■■□□ 2.85
TMEM248-205ENST00000433271 ABCC12Q96J65 1359 aa32.88■■■□□ 2.85
TMEM248-205ENST00000433271 PRR5LQ6MZQ0 368 aa32.88■■■□□ 2.85
TMEM248-205ENST00000433271 RFX5P48382 616 aaPredicted RBP32.87■■■□□ 2.85
TMEM248-205ENST00000433271 NOP58Q9Y2X3 529 aaKnown RBP32.87■■■□□ 2.85
TMEM248-205ENST00000433271 PARP3Q9Y6F1 533 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms