RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
SMPD4-206ENST00000433118 CNPY2Q9Y2B0 182 aa12.65□□□□□ -0.38
SMPD4-206ENST00000433118 RPAP1Q9BWH6 1393 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-206ENST00000433118 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
SMPD4-206ENST00000433118 MCM5P33992 734 aa12.65□□□□□ -0.38
SMPD4-206ENST00000433118 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
SMPD4-206ENST00000433118 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
SMPD4-206ENST00000433118 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 DIAPH3Q9NSV4 1193 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 LIMCH1Q9UPQ0 1083 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 CASTP20810 708 aaKnown RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 SIL1Q9H173 461 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 A1BGP04217 495 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-206ENST00000433118 CPA1P15085 419 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
SMPD4-206ENST00000433118 HEG1Q9ULI3 1381 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 STX6O43752 255 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 TTC14Q96N46 770 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
SMPD4-206ENST00000433118 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 SYT1P21579 422 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 TERF1P54274 439 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 RUFY3Q7L099 469 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
SMPD4-206ENST00000433118 FIBPO43427 364 aa12.62□□□□□ -0.39
SMPD4-206ENST00000433118 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
SMPD4-206ENST00000433118 CLASRPQ8N2M8 674 aaKnown RBP12.62□□□□□ -0.39
SMPD4-206ENST00000433118 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
SMPD4-206ENST00000433118 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
SMPD4-206ENST00000433118 GRM8O00222 908 aa12.62□□□□□ -0.39
SMPD4-206ENST00000433118 MPNDQ8N594 471 aa12.62□□□□□ -0.39
SMPD4-206ENST00000433118 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
SMPD4-206ENST00000433118 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
SMPD4-206ENST00000433118 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 DTNBO60941 627 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 NEXNQ0ZGT2 675 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 FAM184AQ8NB25 1140 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 PDCL3Q9H2J4 239 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 F13A1P00488 732 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 UQCRHP07919 91 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
SMPD4-206ENST00000433118 FAM13BQ9NYF5 915 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
SMPD4-206ENST00000433118 IFIT2P09913 472 aaKnown RBP12.6□□□□□ -0.39
SMPD4-206ENST00000433118 UBE2HP62256 183 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 PRPF40BQ6NWY9 871 aaKnown RBP12.6□□□□□ -0.39
SMPD4-206ENST00000433118 TTLL7Q6ZT98 887 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.394e-7■□□□□ 10.9
SMPD4-206ENST00000433118 LARGE1O95461 756 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-206ENST00000433118 KIAA2012Q0VF49 1180 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 ASAP1Q9ULH1 1129 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 PTH1RQ03431 593 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 NBPF14Q5TI25 921 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
SMPD4-206ENST00000433118 NBPF15Q8N660 670 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 ECHDC1Q9NTX5 307 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
SMPD4-206ENST00000433118 GJB2P29033 226 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-206ENST00000433118 NEURL1BA8MQ27 555 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 LETM1O95202 739 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-206ENST00000433118 KCNJ4P48050 445 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 DNTTIP2Q5QJE6 756 aaKnown RBP12.59□□□□□ -0.39
SMPD4-206ENST00000433118 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
SMPD4-206ENST00000433118 CYP46A1Q9Y6A2 500 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
SMPD4-206ENST00000433118 USP42Q9H9J4 1324 aaKnown RBP12.58□□□□□ -0.4
SMPD4-206ENST00000433118 VPS37CA5D8V6 355 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms