RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MIPOL1Q8TD10 442 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 NACA2Q9H009 215 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 MMADHCQ9H3L0 296 aaPredicted RBP12.69□□□□□ -0.38
CCDC171-202ENST00000432954 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
CCDC171-202ENST00000432954 OPA1O60313 960 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 E2F6O75461 281 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 CYP11B2P19099 503 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 MYSM1Q5VVJ2 828 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 RCSD1Q6JBY9 416 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 B4GALNT2Q8NHY0 566 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 ZBTB10Q96DT7 871 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 FAM81BQ96LP2 452 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
CCDC171-202ENST00000432954 CHUKO15111 745 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 HOXA10P31260 410 aaPredicted RBP12.67□□□□□ -0.38
CCDC171-202ENST00000432954 COPB2P35606 906 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 CDR1P51861 262 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 CCDC80Q76M96 950 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 TBC1D7Q9P0N9 293 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 HMGB1P1B2RPK0 211 aaPredicted RBP12.67□□□□□ -0.38
CCDC171-202ENST00000432954 HARSP12081 509 aaKnown RBP12.67□□□□□ -0.38
CCDC171-202ENST00000432954 SLC8A3P57103 927 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
CCDC171-202ENST00000432954 TAF4BQ92750 862 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 TSGA10Q9BZW7 698 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 KCNF1Q9H3M0 494 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
CCDC171-202ENST00000432954 ATP8A1Q9Y2Q0 1164 aa12.67□□□□□ -0.38
CCDC171-202ENST00000432954 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
CCDC171-202ENST00000432954 KRT38O76015 456 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 OAS2P29728 719 aaKnown RBP12.66□□□□□ -0.38
CCDC171-202ENST00000432954 LMAN1P49257 510 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 ELF2Q15723 593 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
CCDC171-202ENST00000432954 RTF1Q92541 710 aaKnown RBP12.66□□□□□ -0.38
CCDC171-202ENST00000432954 ZNF215Q9UL58 517 aaPredicted RBP12.66□□□□□ -0.38
CCDC171-202ENST00000432954 PDLIM1O00151 329 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 CLCN6P51797 869 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 TMCO4Q5TGY1 634 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 MFN1Q8IWA4 741 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 ADAM21Q9UKJ8 722 aa12.66□□□□□ -0.38
CCDC171-202ENST00000432954 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
CCDC171-202ENST00000432954 SYCE3A1L190 88 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 ERLIN1O75477 346 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 STK10O94804 968 aaKnown RBP12.65□□□□□ -0.38
CCDC171-202ENST00000432954 ISM2Q6H9L7 571 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 TTC30AQ86WT1 665 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
CCDC171-202ENST00000432954 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
CCDC171-202ENST00000432954 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 LRRC10BA6NIK2 292 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 ADCY5O95622 1261 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 RANBP1P43487 201 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 IQCA1Q86XH1 822 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
CCDC171-202ENST00000432954 ZKSCAN4Q969J2 545 aaPredicted RBP12.64□□□□□ -0.39
CCDC171-202ENST00000432954 USP25Q9UHP3 1055 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 INSRP06213 1382 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 UNCXA6NJT0 531 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 AHCYL1O43865 530 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
CCDC171-202ENST00000432954 MAGEA10P43363 369 aaPredicted RBP12.64□□□□□ -0.39
CCDC171-202ENST00000432954 MPP3Q13368 585 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 OR8K1Q8NGG5 319 aa12.64□□□□□ -0.39
CCDC171-202ENST00000432954 ARGLU1Q9NWB6 273 aaPredicted RBP12.64□□□□□ -0.39
CCDC171-202ENST00000432954 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
CCDC171-202ENST00000432954 MBD3O95983 291 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 KCNA2P16389 499 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
CCDC171-202ENST00000432954 USP4Q13107 963 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 FAM114A1Q8IWE2 563 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 CABS1Q96KC9 395 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 BATF3Q9NR55 127 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 PTPRGP23470 1445 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 CBFA2T2O43439 604 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 FESP07332 822 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 CLNS1AP54105 237 aaKnown RBP12.63□□□□□ -0.39
CCDC171-202ENST00000432954 POSTNQ15063 836 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 KIAA0825Q8IV33 1275 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 PARP9Q8IXQ6 854 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 SCLT1Q96NL6 688 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 STK31Q9BXU1 1019 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 PHACTR1Q9C0D0 580 aa12.63□□□□□ -0.39
CCDC171-202ENST00000432954 ELP1O95163 1332 aa12.62□□□□□ -0.39
CCDC171-202ENST00000432954 ARID3CA6NKF2 412 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms