RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
HDAC9-212ENST00000432645 EAF2Q96CJ1 260 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-212ENST00000432645 TLR7Q9NYK1 1049 aaKnown RBP10.12□□□□□ -0.79
HDAC9-212ENST00000432645 AOX1Q06278 1338 aa10.12□□□□□ -0.79
HDAC9-212ENST00000432645 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
HDAC9-212ENST00000432645 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
HDAC9-212ENST00000432645 CWC27Q6UX04 472 aaKnown RBP10.11□□□□□ -0.79
HDAC9-212ENST00000432645 DNAJC10Q8IXB1 793 aa10.11□□□□□ -0.79
HDAC9-212ENST00000432645 CNTROBQ8N137 903 aa10.11□□□□□ -0.79
HDAC9-212ENST00000432645 ROBO1Q9Y6N7 1651 aa10.11□□□□□ -0.79
HDAC9-212ENST00000432645 GLRX3O76003 335 aaKnown RBP10.11□□□□□ -0.79
HDAC9-212ENST00000432645 ECHDC1Q9NTX5 307 aa10.11□□□□□ -0.79
HDAC9-212ENST00000432645 EXOC5O00471 708 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 LMBR1LQ6UX01 489 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 ATG3Q9NT62 314 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
HDAC9-212ENST00000432645 KCPQ6ZWJ8 1503 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 GLI3P10071 1580 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 TTC41PQ6P2S7 1318 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 NEK4P51957 841 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 PTPN12Q05209 780 aaKnown RBP10.1□□□□□ -0.79
HDAC9-212ENST00000432645 NOL8Q76FK4 1167 aaKnown RBP10.1□□□□□ -0.79
HDAC9-212ENST00000432645 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
HDAC9-212ENST00000432645 KAT6BQ8WYB5 2073 aa10.09□□□□□ -0.79
HDAC9-212ENST00000432645 BOLA2Q9H3K6 86 aa10.09□□□□□ -0.79
HDAC9-212ENST00000432645 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-212ENST00000432645 ERBB4Q15303 1308 aa10.09□□□□□ -0.79
HDAC9-212ENST00000432645 ST18O60284 1047 aa10.09□□□□□ -0.79
HDAC9-212ENST00000432645 KCNG1Q9UIX4 513 aa10.09□□□□□ -0.79
HDAC9-212ENST00000432645 DDIT3P35638 169 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 PRIM1P49642 420 aaKnown RBP10.08□□□□□ -0.8
HDAC9-212ENST00000432645 CASP7P55210 303 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 TFCP2Q12800 502 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
HDAC9-212ENST00000432645 SHANK3Q9BYB0 1731 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 MCCP23508 829 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 RFX5P48382 616 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-212ENST00000432645 CCDC85AQ96PX6 553 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-212ENST00000432645 DIAPH3Q9NSV4 1193 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 NDUFB9Q9Y6M9 179 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 SGSM2O43147 1006 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 FOXO4P98177 505 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 RABL6Q3YEC7 729 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-212ENST00000432645 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 COPRSQ9NQ92 184 aa10.08□□□□□ -0.8
HDAC9-212ENST00000432645 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
HDAC9-212ENST00000432645 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
HDAC9-212ENST00000432645 H7C1W4 665 aa10.07□□□□□ -0.8
HDAC9-212ENST00000432645 STARD3NLO95772 234 aa10.07□□□□□ -0.8
HDAC9-212ENST00000432645 MCM4P33991 863 aa10.07□□□□□ -0.8
HDAC9-212ENST00000432645 EDC3Q96F86 508 aaKnown RBP10.07□□□□□ -0.8
HDAC9-212ENST00000432645 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
HDAC9-212ENST00000432645 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
HDAC9-212ENST00000432645 TNPO1Q92973 898 aaKnown RBP10.07□□□□□ -0.8
HDAC9-212ENST00000432645 ZNF594Q96JF6 807 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-212ENST00000432645 GZF1Q9H116 711 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-212ENST00000432645 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 GPTP24298 496 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 ZGPATQ8N5A5 531 aaKnown RBP10.06□□□□□ -0.8
HDAC9-212ENST00000432645 FAM89AQ96GI7 184 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 TNNI3KQ59H18 835 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 CCDC191Q8NCU4 936 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 FAM227BQ96M60 508 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 ZNF830Q96NB3 372 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-212ENST00000432645 DBNLQ9UJU6 430 aaKnown RBP10.06□□□□□ -0.8
HDAC9-212ENST00000432645 FPGT-TNNI3KV9GXZ4 949 aa10.06□□□□□ -0.8
HDAC9-212ENST00000432645 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 SYNE4Q8N205 404 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 EVI5LQ96CN4 794 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 DISP2A7MBM2 1401 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 LAMB4A4D0S4 1761 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 UBR2Q8IWV8 1755 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 AFDNP55196 1824 aaKnown RBP10.05□□□□□ -0.8
HDAC9-212ENST00000432645 SSFA2P28290 1259 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 DDB1Q16531 1140 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 HLFQ16534 295 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 DBNDD2Q9BQY9 259 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 TEX13AQ9BXU3 409 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-212ENST00000432645 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
HDAC9-212ENST00000432645 ZBTB1Q9Y2K1 713 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 HSPA4P34932 840 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 PTH1RQ03431 593 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 TCIRG1Q13488 830 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 PKP1Q13835 747 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 LRRC24Q50LG9 513 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 FSD1Q9BTV5 496 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 PDCL3Q9H2J4 239 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 BCL9O00512 1426 aa10.05□□□□□ -0.8
HDAC9-212ENST00000432645 COL14A1Q05707 1796 aaKnown RBP10.04□□□□□ -0.8
HDAC9-212ENST00000432645 COL16A1Q07092 1604 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-212ENST00000432645 RAD50Q92878 1312 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 TIMM10P62072 90 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 RAB3GAP1Q15042 981 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 DNAJC2Q99543 621 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms