RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
CLK1-204ENST00000432425 EPB42P16452 691 aa6.76□□□□□ -1.33
CLK1-204ENST00000432425 C11orf91Q3C1V1 193 aa6.76□□□□□ -1.33
CLK1-204ENST00000432425 SYT9Q86SS6 491 aa6.76□□□□□ -1.33
CLK1-204ENST00000432425 MKNK1Q9BUB5 465 aa6.76□□□□□ -1.33
CLK1-204ENST00000432425 IRS1P35568 1242 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 GRIN2CQ14957 1233 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 FCHSD1Q86WN1 690 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
CLK1-204ENST00000432425 SLC30A3Q99726 388 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 KLF15Q9UIH9 416 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 BCS1LQ9Y276 419 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 CNTNAP5Q8WYK1 1306 aa6.75□□□□□ -1.33
CLK1-204ENST00000432425 IDH3AP50213 366 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 COL26A1Q96A83 441 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 PTCD1O75127 700 aaKnown RBP6.74□□□□□ -1.33
CLK1-204ENST00000432425 SIN3BO75182 1162 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 ATP2B4P23634 1241 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 ARSDP51689 593 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 KANK3Q6NY19 840 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 C16orf46Q6P387 395 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 RAB44Q7Z6P3 723 aaPredicted RBP6.74□□□□□ -1.33
CLK1-204ENST00000432425 IFT43Q96FT9 208 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 MKL2Q9ULH7 1088 aa6.74□□□□□ -1.33
CLK1-204ENST00000432425 SUPT5HO00267 1087 aaKnown RBP6.73□□□□□ -1.33
CLK1-204ENST00000432425 MICAL2O94851 1124 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 ALAS2P22557 587 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 RASSF7Q02833 373 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 COX20Q5RI15 118 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 BHMTQ93088 406 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 PNMA5Q96PV4 448 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 DMGDHQ9UI17 866 aaKnown RBP6.73□□□□□ -1.33
CLK1-204ENST00000432425 LRFN2Q9ULH4 789 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 TIMELESSQ9UNS1 1208 aa6.73□□□□□ -1.33
CLK1-204ENST00000432425 ELOA3CA0A087WX78 387 aaPredicted RBP6.72□□□□□ -1.33
CLK1-204ENST00000432425 ELOA3DA6NLF2 546 aaPredicted RBP6.72□□□□□ -1.33
CLK1-204ENST00000432425 ELOA3BQ3SY89 546 aa6.72□□□□□ -1.33
CLK1-204ENST00000432425 CHSY3Q70JA7 882 aa6.72□□□□□ -1.33
CLK1-204ENST00000432425 TMEM151AQ8N4L1 468 aa6.72□□□□□ -1.33
CLK1-204ENST00000432425 ELOA3Q8NG57 546 aa6.72□□□□□ -1.33
CLK1-204ENST00000432425 PIK3R2O00459 728 aa6.71□□□□□ -1.33
CLK1-204ENST00000432425 GDF11O95390 407 aa6.71□□□□□ -1.33
CLK1-204ENST00000432425 SNRPNP63162 240 aaKnown RBP6.71□□□□□ -1.33
CLK1-204ENST00000432425 CCINQ13939 588 aa6.71□□□□□ -1.33
CLK1-204ENST00000432425 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.33
CLK1-204ENST00000432425 ARID3AQ99856 593 aa6.71□□□□□ -1.33
CLK1-204ENST00000432425 EFCC1Q9HA90 598 aa6.71□□□□□ -1.33
CLK1-204ENST00000432425 BRD2P25440 801 aaKnown RBP6.71□□□□□ -1.34
CLK1-204ENST00000432425 INPP5BP32019 993 aa6.71□□□□□ -1.34
CLK1-204ENST00000432425 TREML1Q86YW5 311 aa6.71□□□□□ -1.34
CLK1-204ENST00000432425 TNFRSF25Q93038 417 aa6.71□□□□□ -1.34
CLK1-204ENST00000432425 SAP130Q9H0E3 1048 aa6.71□□□□□ -1.34
CLK1-204ENST00000432425 SLAIN2Q9P270 581 aa6.71□□□□□ -1.34
CLK1-204ENST00000432425 ADARB2-AS1A8MUL3 147 aa6.7□□□□□ -1.34
CLK1-204ENST00000432425 GSK3AP49840 483 aa6.7□□□□□ -1.34
CLK1-204ENST00000432425 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
CLK1-204ENST00000432425 CAPN12Q6ZSI9 719 aa6.7□□□□□ -1.34
CLK1-204ENST00000432425 GSX2Q9BZM3 304 aa6.7□□□□□ -1.34
CLK1-204ENST00000432425 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
CLK1-204ENST00000432425 TMEM88BA6NKF7 163 aa6.69□□□□□ -1.34
CLK1-204ENST00000432425 ADH7P40394 386 aa6.69□□□□□ -1.34
CLK1-204ENST00000432425 KRTAP1-3Q8IUG1 177 aa6.69□□□□□ -1.34
CLK1-204ENST00000432425 UBE2OQ9C0C9 1292 aaKnown RBP6.69□□□□□ -1.34
CLK1-204ENST00000432425 IGFLR1Q9H665 355 aa6.69□□□□□ -1.34
CLK1-204ENST00000432425 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
CLK1-204ENST00000432425 GNB5O14775 395 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 NFKB1P19838 968 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 DGKGP49619 791 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 MDFIQ99750 246 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 RTCBQ9Y3I0 505 aaKnown RBP6.68□□□□□ -1.34
CLK1-204ENST00000432425 GRNP28799 593 aaKnown RBP6.68□□□□□ -1.34
CLK1-204ENST00000432425 KRT25Q7Z3Z0 450 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 RGL4Q8IZJ4 473 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 CMTR1Q8N1G2 835 aaKnown RBP6.68□□□□□ -1.34
CLK1-204ENST00000432425 C11orf16Q9NQ32 467 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 FAM13BQ9NYF5 915 aa6.68□□□□□ -1.34
CLK1-204ENST00000432425 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
CLK1-204ENST00000432425 OPLAHO14841 1288 aa6.67□□□□□ -1.34
CLK1-204ENST00000432425 HOXB4P17483 251 aaPredicted RBP6.67□□□□□ -1.34
CLK1-204ENST00000432425 ETFBKMTQ8IXQ9 262 aa6.67□□□□□ -1.34
CLK1-204ENST00000432425 SEPT3Q9UH03 358 aa6.67□□□□□ -1.34
CLK1-204ENST00000432425 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
CLK1-204ENST00000432425 LINC00114Q6XXX2 140 aa6.66□□□□□ -1.34
CLK1-204ENST00000432425 ABTB2Q8N961 1025 aa6.66□□□□□ -1.34
CLK1-204ENST00000432425 STIM2Q9P246 746 aa6.66□□□□□ -1.34
CLK1-204ENST00000432425 XYLBO75191 536 aa6.65□□□□□ -1.34
CLK1-204ENST00000432425 RARAP10276 462 aa6.65□□□□□ -1.34
CLK1-204ENST00000432425 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
CLK1-204ENST00000432425 DNAJB12Q9NXW2 375 aaKnown RBP6.65□□□□□ -1.34
CLK1-204ENST00000432425 NOP53Q9NZM5 478 aaKnown RBP6.65□□□□□ -1.34
CLK1-204ENST00000432425 SLC6A14Q9UN76 642 aa6.65□□□□□ -1.34
CLK1-204ENST00000432425 USTQ9Y2C2 406 aa6.65□□□□□ -1.34
CLK1-204ENST00000432425 M0R082 166 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 SASH3O75995 380 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 MAP3K6O95382 1288 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 SSFA2P28290 1259 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.35
CLK1-204ENST00000432425 PCSK7Q16549 785 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 ALYREFQ86V81 257 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms