RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 HUNKP57058 714 aa21.37■■□□□ 1.01
NUP50-209ENST00000432340 PKN2Q16513 984 aaKnown RBP21.37■■□□□ 1.01
NUP50-209ENST00000432340 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
NUP50-209ENST00000432340 PGAP2Q9UHJ9 254 aa21.37■■□□□ 1.01
NUP50-209ENST00000432340 GLIS2Q9BZE0 524 aaPredicted RBP21.36■■□□□ 1.01
NUP50-209ENST00000432340 REM2Q8IYK8 340 aaPredicted RBP21.35■■□□□ 1.01
NUP50-209ENST00000432340 RPGRQ92834 1020 aaKnown RBP21.35■■□□□ 1.01
NUP50-209ENST00000432340 NYXQ9GZU5 481 aa21.35■■□□□ 1.01
NUP50-209ENST00000432340 PPIP5K2O43314 1243 aa21.33■■□□□ 1.01
NUP50-209ENST00000432340 CRY2Q49AN0 593 aa21.33■■□□□ 1.01
NUP50-209ENST00000432340 RGMBQ6NW40 437 aa21.33■■□□□ 1.01
NUP50-209ENST00000432340 HMOX1P09601 288 aa21.32■■□□□ 1
NUP50-209ENST00000432340 SUPT20HQ8NEM7 779 aa21.32■■□□□ 1
NUP50-209ENST00000432340 CASP8AP2Q9UKL3 1982 aa21.32■■□□□ 1
NUP50-209ENST00000432340 C2orf69Q8N8R5 385 aa21.31■■□□□ 1
NUP50-209ENST00000432340 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
NUP50-209ENST00000432340 BCL2L13Q9BXK5 485 aa21.31■■□□□ 1
NUP50-209ENST00000432340 ZNRF3Q9ULT6 936 aa21.31■■□□□ 1
NUP50-209ENST00000432340 SNED1Q8TER0 1413 aa21.3■■□□□ 1
NUP50-209ENST00000432340 GNAT3A8MTJ3 354 aa21.3■■□□□ 1
NUP50-209ENST00000432340 TRPA1O75762 1119 aa21.3■■□□□ 1
NUP50-209ENST00000432340 HOXA10P31260 410 aaPredicted RBP21.3■■□□□ 1
NUP50-209ENST00000432340 TNIP1Q15025 636 aa21.3■■□□□ 1
NUP50-209ENST00000432340 PANK3Q9H999 370 aa21.3■■□□□ 1
NUP50-209ENST00000432340 RNF186Q9NXI6 227 aa21.3■■□□□ 1
NUP50-209ENST00000432340 NPC1L1Q9UHC9 1359 aa21.3■■□□□ 1
NUP50-209ENST00000432340 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
NUP50-209ENST00000432340 FAM177BA6PVY3 158 aa21.29■■□□□ 1
NUP50-209ENST00000432340 RBM17Q96I25 401 aaKnown RBP21.29■■□□□ 1
NUP50-209ENST00000432340 HPS5Q9UPZ3 1129 aa21.29■■□□□ 1
NUP50-209ENST00000432340 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
NUP50-209ENST00000432340 H7C1D1 291 aa21.28■■□□□ 1
NUP50-209ENST00000432340 GMPSP49915 693 aaPredicted RBP21.28■■□□□ 1
NUP50-209ENST00000432340 KIF23Q02241 960 aaPredicted RBP21.28■■□□□ 1
NUP50-209ENST00000432340 HABP4Q5JVS0 413 aaKnown RBP21.28■■□□□ 1
NUP50-209ENST00000432340 CRAMP1Q96RY5 1269 aa21.28■■□□□ 1
NUP50-209ENST00000432340 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
NUP50-209ENST00000432340 ZNF157P51786 506 aaPredicted RBP21.27■■□□□ 1
NUP50-209ENST00000432340 CXCL9Q07325 125 aa21.27■■□□□ 1
NUP50-209ENST00000432340 ZIC5Q96T25 663 aa21.27■■□□□ 1
NUP50-209ENST00000432340 GBA2Q9HCG7 927 aaPredicted RBP21.27■■□□□ 1
NUP50-209ENST00000432340 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
NUP50-209ENST00000432340 BCORQ6W2J9 1755 aa21.27■■□□□ 1
NUP50-209ENST00000432340 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
NUP50-209ENST00000432340 BTBD11A6QL63 1104 aa21.26■□□□□ 0.99
NUP50-209ENST00000432340 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
NUP50-209ENST00000432340 HDAC9Q9UKV0 1011 aa21.26■□□□□ 0.99
NUP50-209ENST00000432340 IL17REQ8NFR9 667 aa21.25■□□□□ 0.99
NUP50-209ENST00000432340 TNRC18O15417 2968 aaPredicted RBP21.25■□□□□ 0.99
NUP50-209ENST00000432340 CACNA1SQ13698 1873 aa21.24■□□□□ 0.99
NUP50-209ENST00000432340 FAM155AB1AL88 458 aaPredicted RBP21.24■□□□□ 0.99
NUP50-209ENST00000432340 DIAPH1O60610 1272 aaKnown RBP21.24■□□□□ 0.99
NUP50-209ENST00000432340 AOC3Q16853 763 aa21.24■□□□□ 0.99
NUP50-209ENST00000432340 USP48Q86UV5 1035 aa21.24■□□□□ 0.99
NUP50-209ENST00000432340 USP16Q9Y5T5 823 aa21.24■□□□□ 0.99
NUP50-209ENST00000432340 KRT26Q7Z3Y9 468 aa21.22■□□□□ 0.99
NUP50-209ENST00000432340 COL4A5P29400 1685 aa21.21■□□□□ 0.99
NUP50-209ENST00000432340 CNOT7Q9UIV1 285 aaKnown RBP21.21■□□□□ 0.99
NUP50-209ENST00000432340 RIC1Q4ADV7 1423 aa21.21■□□□□ 0.99
NUP50-209ENST00000432340 PIP4K2AP48426 406 aaPredicted RBP21.2■□□□□ 0.98
NUP50-209ENST00000432340 DCPSQ96C86 337 aaKnown RBP21.2■□□□□ 0.98
NUP50-209ENST00000432340 ATP6V0A2Q9Y487 856 aa21.2■□□□□ 0.98
NUP50-209ENST00000432340 IBTKQ9P2D0 1353 aaPredicted RBP21.2■□□□□ 0.98
NUP50-209ENST00000432340 ERVV-1B6SEH8 477 aa21.19■□□□□ 0.98
NUP50-209ENST00000432340 SLC10A3P09131 477 aa21.19■□□□□ 0.98
NUP50-209ENST00000432340 HIRAP54198 1017 aaPredicted RBP21.19■□□□□ 0.98
NUP50-209ENST00000432340 NUTM1Q86Y26 1132 aa21.19■□□□□ 0.98
NUP50-209ENST00000432340 CSRNP1Q96S65 589 aa21.19■□□□□ 0.98
NUP50-209ENST00000432340 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
NUP50-209ENST00000432340 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
NUP50-209ENST00000432340 DPP8Q6V1X1 898 aaPredicted RBP21.18■□□□□ 0.98
NUP50-209ENST00000432340 TRPM4Q8TD43 1214 aa21.18■□□□□ 0.98
NUP50-209ENST00000432340 DPF2Q92785 391 aa21.18■□□□□ 0.98
NUP50-209ENST00000432340 KIAA2012Q0VF49 1180 aa21.17■□□□□ 0.98
NUP50-209ENST00000432340 FBXO46Q6PJ61 603 aaPredicted RBP21.17■□□□□ 0.98
NUP50-209ENST00000432340 MICALL2Q8IY33 904 aa21.17■□□□□ 0.98
NUP50-209ENST00000432340 CEMIPQ8WUJ3 1361 aa21.17■□□□□ 0.98
NUP50-209ENST00000432340 ABCC12Q96J65 1359 aa21.17■□□□□ 0.98
NUP50-209ENST00000432340 RAD17O75943 681 aa21.16■□□□□ 0.98
NUP50-209ENST00000432340 NLRP3Q96P20 1036 aa21.16■□□□□ 0.98
NUP50-209ENST00000432340 HLFQ16534 295 aa21.15■□□□□ 0.98
NUP50-209ENST00000432340 NOM1Q5C9Z4 860 aaKnown RBP21.15■□□□□ 0.98
NUP50-209ENST00000432340 KIF6Q6ZMV9 814 aa21.15■□□□□ 0.98
NUP50-209ENST00000432340 SULF1Q8IWU6 871 aa21.15■□□□□ 0.98
NUP50-209ENST00000432340 NBPF26B4DH59 902 aa21.14■□□□□ 0.97
NUP50-209ENST00000432340 KCNQ3O43525 872 aa21.14■□□□□ 0.97
NUP50-209ENST00000432340 BBOX1O75936 387 aa21.14■□□□□ 0.97
NUP50-209ENST00000432340 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
NUP50-209ENST00000432340 MPNDQ8N594 471 aa21.14■□□□□ 0.97
NUP50-209ENST00000432340 RPS12P25398 132 aaKnown RBP21.13■□□□□ 0.97
NUP50-209ENST00000432340 FKBP1BP68106 108 aa21.13■□□□□ 0.97
NUP50-209ENST00000432340 INTS3Q68E01 1043 aaKnown RBP21.13■□□□□ 0.97
NUP50-209ENST00000432340 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
NUP50-209ENST00000432340 SP8Q8IXZ3 490 aa21.12■□□□□ 0.97
NUP50-209ENST00000432340 ZNF296Q8WUU4 475 aaPredicted RBP21.12■□□□□ 0.97
NUP50-209ENST00000432340 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
NUP50-209ENST00000432340 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
NUP50-209ENST00000432340 MAP3K15Q6ZN16 1313 aa21.1■□□□□ 0.97
NUP50-209ENST00000432340 U2SURPO15042 1029 aaKnown RBP21.1■□□□□ 0.97
NUP50-209ENST00000432340 FXR1P51114 621 aaKnown RBP eCLIP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms