RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 C7orf43Q8WVR3 580 aa4.77□□□□□ -1.65
CDC40-204ENST00000431461 ZNF232Q9UNY5 417 aa4.77□□□□□ -1.65
CDC40-204ENST00000431461 PCDHGA11Q9Y5H2 935 aa4.77□□□□□ -1.65
CDC40-204ENST00000431461 OAS3Q9Y6K5 1087 aaKnown RBP4.77□□□□□ -1.65
CDC40-204ENST00000431461 LZTS3O60299 673 aaPredicted RBP4.76□□□□□ -1.65
CDC40-204ENST00000431461 NOS3P29474 1203 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 IREB2P48200 963 aaKnown RBP4.76□□□□□ -1.65
CDC40-204ENST00000431461 SEMA3FQ13275 785 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 PCSK7Q16549 785 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 ZDHHC1Q8WTX9 485 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 BHMTQ93088 406 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 SCHIP1Q9P0W5 487 aaPredicted RBP4.76□□□□□ -1.65
CDC40-204ENST00000431461 SLC6A14Q9UN76 642 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 KCNH4Q9UQ05 1017 aa4.76□□□□□ -1.65
CDC40-204ENST00000431461 PTCD1O75127 700 aaKnown RBP4.75□□□□□ -1.65
CDC40-204ENST00000431461 NOS2P35228 1153 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 SH3PXD2AQ5TCZ1 1133 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 C1orf53Q5VUE5 145 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 MSL1Q68DK7 614 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 INTS5Q6P9B9 1019 aaKnown RBP4.75□□□□□ -1.65
CDC40-204ENST00000431461 DMRTC2Q8IXT2 367 aaPredicted RBP4.75□□□□□ -1.65
CDC40-204ENST00000431461 TMEM130Q8N3G9 435 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 L3MBTL2Q969R5 705 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 HSH2DQ96JZ2 352 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 UBE2OQ9C0C9 1292 aaKnown RBP4.75□□□□□ -1.65
CDC40-204ENST00000431461 GDPD2Q9HCC8 539 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 BRD7Q9NPI1 651 aa4.75□□□□□ -1.65
CDC40-204ENST00000431461 RGS9O75916 674 aaPredicted RBP4.74□□□□□ -1.65
CDC40-204ENST00000431461 EML3Q32P44 896 aa4.74□□□□□ -1.65
CDC40-204ENST00000431461 MEGF10Q96KG7 1140 aa4.74□□□□□ -1.65
CDC40-204ENST00000431461 CEP63Q96MT8 703 aa4.74□□□□□ -1.65
CDC40-204ENST00000431461 FRRS1LQ9P0K9 344 aa4.74□□□□□ -1.65
CDC40-204ENST00000431461 PSME1Q06323 249 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 FBLN7Q53RD9 439 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 PSAPL1Q6NUJ1 521 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDC40-204ENST00000431461 RHPN1Q8TCX5 695 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 DCAF11Q8TEB1 546 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 TTC9Q92623 222 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 NOD1Q9Y239 953 aa4.73□□□□□ -1.65
CDC40-204ENST00000431461 SFI1A8K8P3 1242 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 GRIK1P39086 918 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 ABL2P42684 1182 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 EPHA4P54764 986 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 SLC9A9Q8IVB4 645 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 AKTIPQ9H8T0 292 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 ZNF358Q9NW07 568 aa4.72□□□□□ -1.65
CDC40-204ENST00000431461 PIK3CDO00329 1044 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 IGLV1-40P01703 118 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 C8AP07357 584 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 SPINK2P20155 84 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 HIRAP54198 1017 aaPredicted RBP4.71□□□□□ -1.66
CDC40-204ENST00000431461 GTF2IP78347 998 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 TPRNQ4KMQ1 711 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 TNS4Q8IZW8 715 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 NFATC2IPQ8NCF5 419 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 MRPL18Q9H0U6 180 aaKnown RBP4.71□□□□□ -1.66
CDC40-204ENST00000431461 SRA1Q9HD15 236 aaKnown RBP4.71□□□□□ -1.66
CDC40-204ENST00000431461 HCN4Q9Y3Q4 1203 aa4.71□□□□□ -1.66
CDC40-204ENST00000431461 SERTM1A2A2V5 107 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 MED26O95402 600 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 SKIP12755 728 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 TYRO3Q06418 890 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 HIF1AQ16665 826 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 OGFOD2Q6N063 350 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 POTEAQ6S8J7 498 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 ZNF280CQ8ND82 737 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 DNAJB12Q9NXW2 375 aaKnown RBP4.7□□□□□ -1.66
CDC40-204ENST00000431461 NAGPAQ9UK23 515 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 RAXQ9Y2V3 346 aa4.7□□□□□ -1.66
CDC40-204ENST00000431461 DLL1O00548 723 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 WNT11O96014 354 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 NCOA4Q13772 614 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 GRIK5Q16478 980 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 Q6ZS46 218 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 DTX1Q86Y01 620 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 WFDC8Q8IUA0 241 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 POU5F2Q8N7G0 328 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 ALG2Q9H553 416 aa4.69□□□□□ -1.66
CDC40-204ENST00000431461 ZBTB7BO15156 539 aaPredicted RBP4.68□□□□□ -1.66
CDC40-204ENST00000431461 ALX3O95076 343 aa4.68□□□□□ -1.66
CDC40-204ENST00000431461 CPB1P15086 417 aa4.68□□□□□ -1.66
CDC40-204ENST00000431461 C11orf16Q9NQ32 467 aa4.68□□□□□ -1.66
CDC40-204ENST00000431461 ADGRE2Q9UHX3 823 aa4.68□□□□□ -1.66
CDC40-204ENST00000431461 CHMP3Q9Y3E7 222 aa4.68□□□□□ -1.66
CDC40-204ENST00000431461 PSMA6P60900 246 aaKnown RBP4.67□□□□□ -1.66
CDC40-204ENST00000431461 PLAURQ03405 335 aa4.67□□□□□ -1.66
CDC40-204ENST00000431461 MAP4K3Q8IVH8 894 aa4.67□□□□□ -1.66
CDC40-204ENST00000431461 DEPDC4Q8N2C3 294 aa4.67□□□□□ -1.66
CDC40-204ENST00000431461 GSX2Q9BZM3 304 aa4.67□□□□□ -1.66
CDC40-204ENST00000431461 PHACTR1Q9C0D0 580 aa4.67□□□□□ -1.66
CDC40-204ENST00000431461 STOML1Q9UBI4 398 aa4.67□□□□□ -1.66
CDC40-204ENST00000431461 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.67□□□□□ -1.66
CDC40-204ENST00000431461 F8W735 103 aaPredicted RBP4.66□□□□□ -1.66
CDC40-204ENST00000431461 M0R2N6 131 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 MAP3K6O95382 1288 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 TGFB1P01137 390 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 MLLT1Q03111 559 aaPredicted RBP4.66□□□□□ -1.66
CDC40-204ENST00000431461 MCM6Q14566 821 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 FAM35AQ86V20 835 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms