RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CHMLP26374 656 aa20.4■□□□□ 0.86
USHBP1-203ENST00000431146 FOXO4P98177 505 aa20.4■□□□□ 0.86
USHBP1-203ENST00000431146 PTPN12Q05209 780 aaKnown RBP20.4■□□□□ 0.86
USHBP1-203ENST00000431146 EAF2Q96CJ1 260 aaPredicted RBP20.4■□□□□ 0.86
USHBP1-203ENST00000431146 CCDC8Q9H0W5 538 aaPredicted RBP20.4■□□□□ 0.86
USHBP1-203ENST00000431146 TCIRG1Q13488 830 aa20.39■□□□□ 0.86
USHBP1-203ENST00000431146 TLR7Q9NYK1 1049 aaKnown RBP20.39■□□□□ 0.86
USHBP1-203ENST00000431146 HLFQ16534 295 aa20.39■□□□□ 0.85
USHBP1-203ENST00000431146 COL15A1P39059 1388 aa20.39■□□□□ 0.85
USHBP1-203ENST00000431146 KCNQ2O43526 872 aa20.38■□□□□ 0.85
USHBP1-203ENST00000431146 ESYT1Q9BSJ8 1104 aa20.38■□□□□ 0.85
USHBP1-203ENST00000431146 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
USHBP1-203ENST00000431146 COPRSQ9NQ92 184 aa20.38■□□□□ 0.85
USHBP1-203ENST00000431146 USP42Q9H9J4 1324 aaKnown RBP20.38■□□□□ 0.85
USHBP1-203ENST00000431146 REC8O95072 547 aa20.37■□□□□ 0.85
USHBP1-203ENST00000431146 CD2BP2O95400 341 aaKnown RBP20.37■□□□□ 0.85
USHBP1-203ENST00000431146 HSCBQ8IWL3 235 aa20.37■□□□□ 0.85
USHBP1-203ENST00000431146 TTC41PQ6P2S7 1318 aa20.37■□□□□ 0.85
USHBP1-203ENST00000431146 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
USHBP1-203ENST00000431146 GPTP24298 496 aa20.36■□□□□ 0.85
USHBP1-203ENST00000431146 IL25Q9H293 177 aa20.36■□□□□ 0.85
USHBP1-203ENST00000431146 ECHDC1Q9NTX5 307 aa20.36■□□□□ 0.85
USHBP1-203ENST00000431146 VPS72Q15906 364 aa20.36■□□□□ 0.85
USHBP1-203ENST00000431146 GLRX3O76003 335 aaKnown RBP20.35■□□□□ 0.85
USHBP1-203ENST00000431146 ATP6V1AP38606 617 aa20.35■□□□□ 0.85
USHBP1-203ENST00000431146 TFCP2Q12800 502 aa20.35■□□□□ 0.85
USHBP1-203ENST00000431146 FAM89AQ96GI7 184 aa20.35■□□□□ 0.85
USHBP1-203ENST00000431146 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
USHBP1-203ENST00000431146 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
USHBP1-203ENST00000431146 GIGYF2Q6Y7W6 1299 aaKnown RBP20.34■□□□□ 0.85
USHBP1-203ENST00000431146 SYNE4Q8N205 404 aa20.34■□□□□ 0.85
USHBP1-203ENST00000431146 GPATCH3Q96I76 525 aa20.34■□□□□ 0.85
USHBP1-203ENST00000431146 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
USHBP1-203ENST00000431146 SIK1P57059 783 aa20.33■□□□□ 0.85
USHBP1-203ENST00000431146 CERKQ8TCT0 537 aa20.33■□□□□ 0.85
USHBP1-203ENST00000431146 USP21Q9UK80 565 aa20.33■□□□□ 0.85
USHBP1-203ENST00000431146 NUP98P52948 1817 aa20.33■□□□□ 0.85
USHBP1-203ENST00000431146 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.84
USHBP1-203ENST00000431146 ZNF594Q96JF6 807 aaPredicted RBP20.33■□□□□ 0.84
USHBP1-203ENST00000431146 CCDC85AQ96PX6 553 aaPredicted RBP20.33■□□□□ 0.84
USHBP1-203ENST00000431146 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.84
USHBP1-203ENST00000431146 ITPK1Q13572 414 aa20.32■□□□□ 0.84
USHBP1-203ENST00000431146 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
USHBP1-203ENST00000431146 SNX21Q969T3 373 aa20.32■□□□□ 0.84
USHBP1-203ENST00000431146 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
USHBP1-203ENST00000431146 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
USHBP1-203ENST00000431146 IL6STP40189 918 aaPredicted RBP20.31■□□□□ 0.84
USHBP1-203ENST00000431146 CRKLP46109 303 aaKnown RBP20.31■□□□□ 0.84
USHBP1-203ENST00000431146 TRIM28Q13263 835 aaKnown RBP20.31■□□□□ 0.84
USHBP1-203ENST00000431146 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
USHBP1-203ENST00000431146 MYH14Q7Z406 1995 aaKnown RBP20.31■□□□□ 0.84
USHBP1-203ENST00000431146 TNNI3KQ59H18 835 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
USHBP1-203ENST00000431146 BOLA2Q9H3K6 86 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 FPGT-TNNI3KV9GXZ4 949 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 ANKRD36CQ5JPF3 1778 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 SPATA31A6Q5VVP1 1343 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 FAM182BQ5T319 152 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 PTF1AQ7RTS3 328 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 CCDC87Q9NVE4 849 aa20.3■□□□□ 0.84
USHBP1-203ENST00000431146 PCCAP05165 728 aaPredicted RBP20.29■□□□□ 0.84
USHBP1-203ENST00000431146 HSPA1LP34931 641 aa20.29■□□□□ 0.84
USHBP1-203ENST00000431146 LRRC24Q50LG9 513 aa20.29■□□□□ 0.84
USHBP1-203ENST00000431146 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
USHBP1-203ENST00000431146 ATG9AQ7Z3C6 839 aa20.29■□□□□ 0.84
USHBP1-203ENST00000431146 ZBTB38Q8NAP3 1195 aaPredicted RBP20.29■□□□□ 0.84
USHBP1-203ENST00000431146 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
USHBP1-203ENST00000431146 KCNQ4P56696 695 aa20.29■□□□□ 0.84
USHBP1-203ENST00000431146 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
USHBP1-203ENST00000431146 MEX3CQ5U5Q3 659 aaKnown RBP20.28■□□□□ 0.84
USHBP1-203ENST00000431146 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.84
USHBP1-203ENST00000431146 RABEP1Q15276 862 aa20.27■□□□□ 0.84
USHBP1-203ENST00000431146 PUS3Q9BZE2 481 aaKnown RBP20.27■□□□□ 0.84
USHBP1-203ENST00000431146 DBNDD2Q9BQY9 259 aa20.27■□□□□ 0.84
USHBP1-203ENST00000431146 PALD1Q9ULE6 856 aa20.27■□□□□ 0.84
USHBP1-203ENST00000431146 SGSM2O43147 1006 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 FOXD4L1Q9NU39 408 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 UBN2Q6ZU65 1347 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 EVI5LQ96CN4 794 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 EDC3Q96F86 508 aaKnown RBP20.26■□□□□ 0.83
USHBP1-203ENST00000431146 DIAPH3Q9NSV4 1193 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 NDUFB9Q9Y6M9 179 aa20.26■□□□□ 0.83
USHBP1-203ENST00000431146 K7ELQ4 463 aaPredicted RBP20.25■□□□□ 0.83
USHBP1-203ENST00000431146 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
USHBP1-203ENST00000431146 TRMT112Q9UI30 125 aaKnown RBP20.25■□□□□ 0.83
USHBP1-203ENST00000431146 ERVV-1B6SEH8 477 aa20.24■□□□□ 0.83
USHBP1-203ENST00000431146 EYA2O00167 538 aa20.24■□□□□ 0.83
USHBP1-203ENST00000431146 FAM177BA6PVY3 158 aa20.24■□□□□ 0.83
USHBP1-203ENST00000431146 SMARCC1Q92922 1105 aaPredicted RBP20.24■□□□□ 0.83
USHBP1-203ENST00000431146 NEUROD6Q96NK8 337 aa20.24■□□□□ 0.83
USHBP1-203ENST00000431146 FRAT2O75474 233 aaPredicted RBP20.23■□□□□ 0.83
USHBP1-203ENST00000431146 IL15P40933 162 aaPredicted RBP20.23■□□□□ 0.83
USHBP1-203ENST00000431146 TIMM10P62072 90 aa20.23■□□□□ 0.83
USHBP1-203ENST00000431146 PLA2G12BQ9BX93 195 aa20.23■□□□□ 0.83
USHBP1-203ENST00000431146 MYH3P11055 1940 aa20.22■□□□□ 0.83
USHBP1-203ENST00000431146 EP400Q96L91 3159 aa20.22■□□□□ 0.83
USHBP1-203ENST00000431146 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-203ENST00000431146 MCCP23508 829 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms