RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 IGKV5-2P06315 115 aa13.89□□□□□ -0.19
CHD4-202ENST00000430771 MMP10P09238 476 aa13.89□□□□□ -0.19
CHD4-202ENST00000430771 CWF19L2Q2TBE0 894 aaKnown RBP13.89□□□□□ -0.19
CHD4-202ENST00000430771 INTS3Q68E01 1043 aaKnown RBP13.89□□□□□ -0.19
CHD4-202ENST00000430771 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
CHD4-202ENST00000430771 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
CHD4-202ENST00000430771 TMEM57Q8N5G2 664 aa13.89□□□□□ -0.19
CHD4-202ENST00000430771 MYH3P11055 1940 aa13.89□□□□□ -0.19
CHD4-202ENST00000430771 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
CHD4-202ENST00000430771 DDX60Q8IY21 1712 aaKnown RBP13.88□□□□□ -0.19
CHD4-202ENST00000430771 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
CHD4-202ENST00000430771 ST5P78524 1137 aa13.88□□□□□ -0.19
CHD4-202ENST00000430771 DDR1Q08345 913 aa13.88□□□□□ -0.19
CHD4-202ENST00000430771 CNBD1Q8NA66 436 aa13.88□□□□□ -0.19
CHD4-202ENST00000430771 PANK1Q8TE04 598 aa13.88□□□□□ -0.19
CHD4-202ENST00000430771 UTP14AQ9BVJ6 771 aaKnown RBP13.88□□□□□ -0.19
CHD4-202ENST00000430771 CHMP4BQ9H444 224 aaKnown RBP13.88□□□□□ -0.19
CHD4-202ENST00000430771 TNNQ9UQP3 1299 aa13.88□□□□□ -0.19
CHD4-202ENST00000430771 SH3TC1Q8TE82 1336 aa13.88□□□□□ -0.19
CHD4-202ENST00000430771 LRP5O75197 1615 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 NTSR2O95665 410 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 SERPINB2P05120 415 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 RLBP1P12271 317 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 HSP90B1P14625 803 aaKnown RBP13.87□□□□□ -0.19
CHD4-202ENST00000430771 TM4SF1P30408 202 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 GCKRQ14397 625 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 MVPQ14764 893 aaKnown RBP13.87□□□□□ -0.19
CHD4-202ENST00000430771 C9orf78Q9NZ63 289 aaPredicted RBP13.87□□□□□ -0.19
CHD4-202ENST00000430771 TRMT112Q9UI30 125 aaKnown RBP13.87□□□□□ -0.19
CHD4-202ENST00000430771 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
CHD4-202ENST00000430771 TNRC6CQ9HCJ0 1690 aaKnown RBP13.86□□□□□ -0.19
CHD4-202ENST00000430771 KIF13BQ9NQT8 1826 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 GRM8O00222 908 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
CHD4-202ENST00000430771 GTF2E1P29083 439 aaPredicted RBP13.86□□□□□ -0.19
CHD4-202ENST00000430771 SUSD4Q5VX71 490 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
CHD4-202ENST00000430771 SPON1Q9HCB6 807 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 C10orf71Q711Q0 1435 aa13.86□□□□□ -0.19
CHD4-202ENST00000430771 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
CHD4-202ENST00000430771 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
CHD4-202ENST00000430771 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
CHD4-202ENST00000430771 COG6Q9Y2V7 657 aa13.85□□□□□ -0.19
CHD4-202ENST00000430771 ANKRD31Q8N7Z5 1873 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 ABCC12Q96J65 1359 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 NEFLP07196 543 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 GNAI3P08754 354 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 UBTFL1P0CB47 393 aaPredicted RBP13.84□□□□□ -0.19
CHD4-202ENST00000430771 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 PRR5LQ6MZQ0 368 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 UTYO14607 1347 aa13.84□□□□□ -0.19
CHD4-202ENST00000430771 NUTM1Q86Y26 1132 aa13.83□□□□□ -0.2
CHD4-202ENST00000430771 COL11A2P13942 1736 aaPredicted RBP13.83□□□□□ -0.2
CHD4-202ENST00000430771 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.2
CHD4-202ENST00000430771 H7C1W4 665 aa13.82□□□□□ -0.2
CHD4-202ENST00000430771 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
CHD4-202ENST00000430771 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
CHD4-202ENST00000430771 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
CHD4-202ENST00000430771 MEIS3Q99687 375 aa13.82□□□□□ -0.2
CHD4-202ENST00000430771 SGIP1Q9BQI5 828 aa13.82□□□□□ -0.2
CHD4-202ENST00000430771 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
CHD4-202ENST00000430771 PTGER2P43116 358 aa13.81□□□□□ -0.2
CHD4-202ENST00000430771 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
CHD4-202ENST00000430771 PLA2G12BQ9BX93 195 aa13.81□□□□□ -0.2
CHD4-202ENST00000430771 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
CHD4-202ENST00000430771 PDE8AO60658 829 aa13.8□□□□□ -0.2
CHD4-202ENST00000430771 GNAI2P04899 355 aa13.8□□□□□ -0.2
CHD4-202ENST00000430771 CASP7P55210 303 aa13.8□□□□□ -0.2
CHD4-202ENST00000430771 AAMPQ13685 434 aa13.8□□□□□ -0.2
CHD4-202ENST00000430771 CRBNQ96SW2 442 aa13.8□□□□□ -0.2
CHD4-202ENST00000430771 PDZRN3Q9UPQ7 1066 aa13.8□□□□□ -0.2
CHD4-202ENST00000430771 KIAA1551Q9HCM1 1747 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 ZBTB7BO15156 539 aaPredicted RBP13.79□□□□□ -0.2
CHD4-202ENST00000430771 PDE6BP35913 854 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 CTSWP56202 376 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 SLC10A5Q5PT55 438 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 BRIP1Q9BX63 1249 aa13.79□□□□□ -0.2
CHD4-202ENST00000430771 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
CHD4-202ENST00000430771 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
CHD4-202ENST00000430771 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
CHD4-202ENST00000430771 JARID2Q92833 1246 aaPredicted RBP13.78□□□□□ -0.2
CHD4-202ENST00000430771 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
CHD4-202ENST00000430771 CACNA1SQ13698 1873 aa13.77□□□□□ -0.21
CHD4-202ENST00000430771 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
CHD4-202ENST00000430771 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.21
CHD4-202ENST00000430771 RTL9Q8NET4 1388 aa13.77□□□□□ -0.21
CHD4-202ENST00000430771 BICC1Q9H694 974 aaKnown RBP13.77□□□□□ -0.21
CHD4-202ENST00000430771 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
CHD4-202ENST00000430771 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
CHD4-202ENST00000430771 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
CHD4-202ENST00000430771 SYNE4Q8N205 404 aa13.76□□□□□ -0.21
CHD4-202ENST00000430771 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
CHD4-202ENST00000430771 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
CHD4-202ENST00000430771 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
CHD4-202ENST00000430771 CD2APQ9Y5K6 639 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms