RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 CWC25Q9NXE8 425 aaPredicted RBP24.54■■□□□ 1.52
PTCD1-203ENST00000430029 COL24A1Q17RW2 1714 aa24.53■■□□□ 1.52
PTCD1-203ENST00000430029 PARP10Q53GL7 1025 aa24.53■■□□□ 1.52
PTCD1-203ENST00000430029 SLC16A10Q8TF71 515 aa24.53■■□□□ 1.52
PTCD1-203ENST00000430029 SETDB2Q96T68 719 aa24.53■■□□□ 1.52
PTCD1-203ENST00000430029 IBTKQ9P2D0 1353 aaPredicted RBP24.53■■□□□ 1.52
PTCD1-203ENST00000430029 DDR1Q08345 913 aa24.52■■□□□ 1.52
PTCD1-203ENST00000430029 JARID2Q92833 1246 aaPredicted RBP24.51■■□□□ 1.51
PTCD1-203ENST00000430029 USP44Q9H0E7 712 aa24.51■■□□□ 1.51
PTCD1-203ENST00000430029 FAM177BA6PVY3 158 aa24.5■■□□□ 1.51
PTCD1-203ENST00000430029 ZBTB7BO15156 539 aaPredicted RBP24.5■■□□□ 1.51
PTCD1-203ENST00000430029 ZBTB7AO95365 584 aa24.5■■□□□ 1.51
PTCD1-203ENST00000430029 NTSR2O95665 410 aa24.5■■□□□ 1.51
PTCD1-203ENST00000430029 MEIS3Q99687 375 aa24.5■■□□□ 1.51
PTCD1-203ENST00000430029 GRM8O00222 908 aa24.49■■□□□ 1.51
PTCD1-203ENST00000430029 POLRMTO00411 1230 aaKnown RBP24.49■■□□□ 1.51
PTCD1-203ENST00000430029 CARMIL3Q8ND23 1372 aa24.49■■□□□ 1.51
PTCD1-203ENST00000430029 H7C1W4 665 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 UTYO14607 1347 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 MMP10P09238 476 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 NBPF7P0C2Y1 421 aaPredicted RBP24.48■■□□□ 1.51
PTCD1-203ENST00000430029 CASP7P55210 303 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 PPP1R42Q7Z4L9 355 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 SYNE4Q8N205 404 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 UTP14AQ9BVJ6 771 aaKnown RBP24.48■■□□□ 1.51
PTCD1-203ENST00000430029 DDX19BQ9UMR2 479 aa24.48■■□□□ 1.51
PTCD1-203ENST00000430029 SERPINB2P05120 415 aa24.47■■□□□ 1.51
PTCD1-203ENST00000430029 PCCAP05165 728 aaPredicted RBP24.47■■□□□ 1.51
PTCD1-203ENST00000430029 RTL5Q5HYW3 569 aaPredicted RBP24.47■■□□□ 1.51
PTCD1-203ENST00000430029 ZBTB38Q8NAP3 1195 aaPredicted RBP24.47■■□□□ 1.51
PTCD1-203ENST00000430029 EXOC6Q8TAG9 804 aa24.47■■□□□ 1.51
PTCD1-203ENST00000430029 FAM89AQ96GI7 184 aa24.47■■□□□ 1.51
PTCD1-203ENST00000430029 C9orf78Q9NZ63 289 aaPredicted RBP24.47■■□□□ 1.51
PTCD1-203ENST00000430029 TRMT112Q9UI30 125 aaKnown RBP24.47■■□□□ 1.51
PTCD1-203ENST00000430029 NUTM1Q86Y26 1132 aa24.46■■□□□ 1.51
PTCD1-203ENST00000430029 MTFR1LQ9H019 292 aa24.46■■□□□ 1.51
PTCD1-203ENST00000430029 UBE3BQ7Z3V4 1068 aa24.45■■□□□ 1.5
PTCD1-203ENST00000430029 NBPF5PQ86XG9 351 aaPredicted RBP24.45■■□□□ 1.5
PTCD1-203ENST00000430029 ATF5Q9Y2D1 282 aaPredicted RBP24.45■■□□□ 1.5
PTCD1-203ENST00000430029 NRXN2Q9P2S2 1712 aa24.44■■□□□ 1.5
PTCD1-203ENST00000430029 SH3TC1Q8TE82 1336 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 ERFEQ4G0M1 354 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 PRR5LQ6MZQ0 368 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 CCDC24Q8N4L8 307 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 SUCLG2Q96I99 432 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 NYXQ9GZU5 481 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 ZBTB40Q9NUA8 1239 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
PTCD1-203ENST00000430029 ABCC12Q96J65 1359 aa24.42■■□□□ 1.5
PTCD1-203ENST00000430029 CDHR2Q9BYE9 1310 aa24.42■■□□□ 1.5
PTCD1-203ENST00000430029 SRCAPQ6ZRS2 3230 aa24.42■■□□□ 1.5
PTCD1-203ENST00000430029 GNAI3P08754 354 aa24.42■■□□□ 1.5
PTCD1-203ENST00000430029 UBTFL1P0CB47 393 aaPredicted RBP24.42■■□□□ 1.5
PTCD1-203ENST00000430029 TPTE2Q6XPS3 522 aa24.42■■□□□ 1.5
PTCD1-203ENST00000430029 KAZALD1Q96I82 304 aa24.42■■□□□ 1.5
PTCD1-203ENST00000430029 CNBD1Q8NA66 436 aa24.41■■□□□ 1.5
PTCD1-203ENST00000430029 C1orf115Q9H7X2 142 aa24.41■■□□□ 1.5
PTCD1-203ENST00000430029 IRS4O14654 1257 aaPredicted RBP24.4■■□□□ 1.5
PTCD1-203ENST00000430029 NEFLP07196 543 aa24.4■■□□□ 1.5
PTCD1-203ENST00000430029 EPHA10Q5JZY3 1008 aa24.4■■□□□ 1.5
PTCD1-203ENST00000430029 SGIP1Q9BQI5 828 aa24.4■■□□□ 1.5
PTCD1-203ENST00000430029 LRRFIP2Q9Y608 721 aaKnown RBP24.4■■□□□ 1.5
PTCD1-203ENST00000430029 DDX60Q8IY21 1712 aaKnown RBP24.39■■□□□ 1.5
PTCD1-203ENST00000430029 HCLS1P14317 486 aaPredicted RBP24.39■■□□□ 1.49
PTCD1-203ENST00000430029 GTF2E1P29083 439 aaPredicted RBP24.39■■□□□ 1.49
PTCD1-203ENST00000430029 SLC10A5Q5PT55 438 aa24.39■■□□□ 1.49
PTCD1-203ENST00000430029 PTGER2P43116 358 aa24.38■■□□□ 1.49
PTCD1-203ENST00000430029 PLA2G12BQ9BX93 195 aa24.38■■□□□ 1.49
PTCD1-203ENST00000430029 LAMB2P55268 1798 aa24.37■■□□□ 1.49
PTCD1-203ENST00000430029 GNAI2P04899 355 aa24.37■■□□□ 1.49
PTCD1-203ENST00000430029 FOXO4P98177 505 aa24.37■■□□□ 1.49
PTCD1-203ENST00000430029 C3orf67Q6ZVT6 689 aa24.37■■□□□ 1.49
PTCD1-203ENST00000430029 CHMP4BQ9H444 224 aaKnown RBP24.37■■□□□ 1.49
PTCD1-203ENST00000430029 NPHP1O15259 732 aa24.36■■□□□ 1.49
PTCD1-203ENST00000430029 BICC1Q9H694 974 aaKnown RBP24.36■■□□□ 1.49
PTCD1-203ENST00000430029 TNRC6CQ9HCJ0 1690 aaKnown RBP24.36■■□□□ 1.49
PTCD1-203ENST00000430029 LRP5O75197 1615 aa24.35■■□□□ 1.49
PTCD1-203ENST00000430029 PDE8AO60658 829 aa24.35■■□□□ 1.49
PTCD1-203ENST00000430029 POLD1P28340 1107 aa24.35■■□□□ 1.49
PTCD1-203ENST00000430029 ST5P78524 1137 aa24.35■■□□□ 1.49
PTCD1-203ENST00000430029 ANKRD44Q8N8A2 993 aa24.35■■□□□ 1.49
PTCD1-203ENST00000430029 ANKRD31Q8N7Z5 1873 aa24.34■■□□□ 1.49
PTCD1-203ENST00000430029 RIC1Q4ADV7 1423 aa24.34■■□□□ 1.49
PTCD1-203ENST00000430029 RABL6Q3YEC7 729 aaPredicted RBP24.33■■□□□ 1.49
PTCD1-203ENST00000430029 PCDHB15Q9Y5E8 787 aa24.33■■□□□ 1.49
PTCD1-203ENST00000430029 SPON1Q9HCB6 807 aa24.32■■□□□ 1.48
PTCD1-203ENST00000430029 HDAC5Q9UQL6 1122 aa24.32■■□□□ 1.48
PTCD1-203ENST00000430029 MYH3P11055 1940 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 CSF1RP07333 972 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 CTSWP56202 376 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 AAMPQ13685 434 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 CEP85Q6P2H3 762 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 LMBR1LQ6UX01 489 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 C10orf71Q711Q0 1435 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 TTLL11Q8NHH1 800 aa24.31■■□□□ 1.48
PTCD1-203ENST00000430029 NLRP3Q96P20 1036 aa24.3■■□□□ 1.48
PTCD1-203ENST00000430029 CCDC85AQ96PX6 553 aaPredicted RBP24.3■■□□□ 1.48
PTCD1-203ENST00000430029 BRIP1Q9BX63 1249 aa24.3■■□□□ 1.48
PTCD1-203ENST00000430029 HSP90B1P14625 803 aaKnown RBP24.29■■□□□ 1.48
PTCD1-203ENST00000430029 SF3B3Q15393 1217 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms