RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 UQCRFS1P1P0C7P4 283 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 ZNF804AQ7Z570 1209 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 USP19O94966 1318 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
PTCH1-207ENST00000429896 ATP2B2Q01814 1243 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-207ENST00000429896 CTNNA3Q9UI47 895 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 IQGAP1P46940 1657 aa15.43■□□□□ 0.06
PTCH1-207ENST00000429896 H0YIN7 160 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 IL15P40933 162 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-207ENST00000429896 G2E3Q7L622 706 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 STK11IPQ8N1F8 1099 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 MST1RQ04912 1400 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 EYA3Q99504 573 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 CSPP1Q1MSJ5 1256 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 TCEAL9Q9UHQ7 104 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 MSL1Q68DK7 614 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 FAM89AQ96GI7 184 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 CCDC34Q96HJ3 373 aa15.42■□□□□ 0.06
PTCH1-207ENST00000429896 C22orf23Q9BZE7 217 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 PPLO60437 1756 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 SF3A1Q15459 793 aaKnown RBP15.41■□□□□ 0.06
PTCH1-207ENST00000429896 CWC27Q6UX04 472 aaKnown RBP15.41■□□□□ 0.06
PTCH1-207ENST00000429896 ATP8B2P98198 1209 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 CCAR2Q8N163 923 aaKnown RBP15.41■□□□□ 0.06
PTCH1-207ENST00000429896 ERBB4Q15303 1308 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 KDM4AO75164 1064 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 LDHCP07864 332 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 ATP2B3Q16720 1220 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 JDP2Q8WYK2 163 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
PTCH1-207ENST00000429896 PDE8AO60658 829 aa15.4■□□□□ 0.06
PTCH1-207ENST00000429896 CCAR1Q8IX12 1150 aaKnown RBP15.4■□□□□ 0.06
PTCH1-207ENST00000429896 PIGBQ92521 554 aa15.4■□□□□ 0.06
PTCH1-207ENST00000429896 TPD52L1Q16890 204 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-207ENST00000429896 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
PTCH1-207ENST00000429896 MED14O60244 1454 aa15.4■□□□□ 0.06
PTCH1-207ENST00000429896 USP16Q9Y5T5 823 aa15.4■□□□□ 0.06
PTCH1-207ENST00000429896 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-207ENST00000429896 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
PTCH1-207ENST00000429896 HDAC9Q9UKV0 1011 aa15.4■□□□□ 0.06
PTCH1-207ENST00000429896 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-207ENST00000429896 CRACR2BQ8N4Y2 399 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-207ENST00000429896 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 ZC3H12CQ9C0D7 883 aaKnown RBP15.39■□□□□ 0.05
PTCH1-207ENST00000429896 ECHDC1Q9NTX5 307 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 PALLDQ8WX93 1383 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 GSTO1P78417 241 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 PTMSP20962 102 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 ZNF287Q9HBT7 754 aa15.39■□□□□ 0.05
PTCH1-207ENST00000429896 MYO1BO43795 1136 aa15.38■□□□□ 0.05
PTCH1-207ENST00000429896 RHPN1Q8TCX5 695 aa15.38■□□□□ 0.05
PTCH1-207ENST00000429896 PDE6BP35913 854 aa15.38■□□□□ 0.05
PTCH1-207ENST00000429896 BICC1Q9H694 974 aaKnown RBP15.38■□□□□ 0.05
PTCH1-207ENST00000429896 SPATA31A1Q5TZJ5 1347 aa15.38■□□□□ 0.05
PTCH1-207ENST00000429896 CYP27B1O15528 508 aa15.38■□□□□ 0.05
PTCH1-207ENST00000429896 ZGPATQ8N5A5 531 aaKnown RBP15.38■□□□□ 0.05
PTCH1-207ENST00000429896 GOLGA6L3A6NEY3 463 aa15.38■□□□□ 0.05
PTCH1-207ENST00000429896 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
PTCH1-207ENST00000429896 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
PTCH1-207ENST00000429896 TTLL12Q14166 644 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-207ENST00000429896 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-207ENST00000429896 NCAPD2Q15021 1401 aa15.37■□□□□ 0.05
PTCH1-207ENST00000429896 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-207ENST00000429896 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
PTCH1-207ENST00000429896 BAG3O95817 575 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 ITGA6P23229 1130 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 IMMTQ16891 758 aaKnown RBP15.36■□□□□ 0.05
PTCH1-207ENST00000429896 SNRKQ9NRH2 765 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 GOLIM4O00461 696 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 IL6STP40189 918 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-207ENST00000429896 RIMBP2O15034 1052 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 XBP1P17861 261 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTCH1-207ENST00000429896 MPHOSPH10O00566 681 aaKnown RBP15.36■□□□□ 0.05
PTCH1-207ENST00000429896 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
PTCH1-207ENST00000429896 GOLGA6L1Q8N7Z2 621 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 BRMS1Q9HCU9 246 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 CCDC69A6NI79 296 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 OGFOD1Q8N543 542 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
PTCH1-207ENST00000429896 UBR1Q8IWV7 1749 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
PTCH1-207ENST00000429896 BARGINQ6ZT62 677 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 FBXO41Q8TF61 875 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 MAP3K15Q6ZN16 1313 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 SPATA31A5Q5VU36 1347 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 SPATA31A7Q8IWB4 1347 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 KRI1Q8N9T8 703 aaKnown RBP15.34■□□□□ 0.05
PTCH1-207ENST00000429896 KCNQ4P56696 695 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms