RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CDC25BP30305 580 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 FOXO3O43524 673 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 ARHGAP29Q52LW3 1261 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 SYT10Q6XYQ8 523 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
SEMA4D-209ENST00000429836 NPHP3Q7Z494 1330 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 ST5P78524 1137 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 STK3Q13188 491 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 AOX1Q06278 1338 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
SEMA4D-209ENST00000429836 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 CLTCQ00610 1675 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 SIGLEC1Q9BZZ2 1709 aa13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 SEC31AO94979 1220 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 FLIIQ13045 1269 aa13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 ERCC4Q92889 916 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
SEMA4D-209ENST00000429836 NEMFO60524 1076 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 RAB11FIP3O75154 756 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 EIF4A2Q14240 407 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 COG3Q96JB2 828 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 TMX1Q9H3N1 280 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 ATP7BP35670 1465 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 BECN2A8MW95 431 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 MLECQ14165 292 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 FAM193AP78312 1265 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 SMARCE1Q969G3 411 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 USP44Q9H0E7 712 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 RSPH14Q9UHP6 348 aa13.03□□□□□ -0.32
SEMA4D-209ENST00000429836 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 E4F1Q66K89 784 aaPredicted RBP13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 LCMT1Q9UIC8 334 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 TRIM66O15016 1216 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 PPP1R13BQ96KQ4 1090 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 TSPYL1Q9H0U9 437 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 EPC1Q9H2F5 836 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
SEMA4D-209ENST00000429836 CRB1P82279 1406 aa13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 DHX40Q8IX18 779 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 C10orf67Q8IYJ2 551 aa13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 TAF6LQ9Y6J9 622 aa13.01□□□□□ -0.33
SEMA4D-209ENST00000429836 AATKQ6ZMQ8 1374 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 SOX12O15370 315 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 JAK2O60674 1132 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 ZRANB2O95218 330 aaKnown RBP eCLIP13□□□□□ -0.33
SEMA4D-209ENST00000429836 PDCP20941 246 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 FOSBP53539 338 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 CCDC93Q567U6 631 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 AOPEPQ8N6M6 819 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 SSH3Q8TE77 659 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 FTOQ9C0B1 505 aaKnown RBP eCLIP13□□□□□ -0.33
SEMA4D-209ENST00000429836 RICTORQ6R327 1708 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 PIK3C2BO00750 1634 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 GYS2P54840 703 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 TEX35Q5T0J7 233 aa13□□□□□ -0.33
SEMA4D-209ENST00000429836 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
SEMA4D-209ENST00000429836 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 STX1AQ16623 288 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 ZKSCAN1P17029 563 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 CCDC34Q96HJ3 373 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 ORC3Q9UBD5 711 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 ADCY9O60503 1353 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 HOMER1Q86YM7 354 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 CCDC191Q8NCU4 936 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 UBXN4Q92575 508 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms