RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 TPM2P07951 284 aa15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■□□□ 12.6
SNRNP200-202ENST00000429650 CCDC83Q8IWF9 413 aa15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 CCDC39Q9UFE4 941 aa15.97■□□□□ 0.15
SNRNP200-202ENST00000429650 ZSCAN31Q96LW9 406 aaPredicted RBP15.96■□□□□ 0.15
SNRNP200-202ENST00000429650 SH2B1Q9NRF2 756 aaPredicted RBP15.96■□□□□ 0.15
SNRNP200-202ENST00000429650 GJB2P29033 226 aa15.96■□□□□ 0.14
SNRNP200-202ENST00000429650 CCDC183Q5T5S1 534 aa15.96■□□□□ 0.14
SNRNP200-202ENST00000429650 FAM227BQ96M60 508 aa15.96■□□□□ 0.14
SNRNP200-202ENST00000429650 RBM8AQ9Y5S9 174 aaKnown RBP15.96■□□□□ 0.14
SNRNP200-202ENST00000429650 HIP1O00291 1037 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 IGKV5-2P06315 115 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 MCM5P33992 734 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 UBE2HP62256 183 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 CCDC8Q9H0W5 538 aaPredicted RBP15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 ATP6V1DQ9Y5K8 247 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 C5P01031 1676 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 ST3GAL1Q11201 340 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 NMIQ13287 307 aaPredicted RBP15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 MAP4K1Q92918 833 aa15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 TLR7Q9NYK1 1049 aaKnown RBP15.95■□□□□ 0.14
SNRNP200-202ENST00000429650 ZKSCAN1P17029 563 aaPredicted RBP15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 MTMR6Q9Y217 621 aa15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 ERBB3P21860 1342 aa15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 RIC3Q7Z5B4 369 aa15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
SNRNP200-202ENST00000429650 FIBPO43427 364 aa15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 ME3Q16798 604 aa15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 SIL1Q9H173 461 aa15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 SCN11AQ9UI33 1791 aa15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 LARP1Q6PKG0 1096 aaKnown RBP15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
SNRNP200-202ENST00000429650 DTNBO60941 627 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 LETM1O95202 739 aaPredicted RBP15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 KCNJ4P48050 445 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 BOLA2Q9H3K6 86 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 MRC1P22897 1456 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 KDM6AO15550 1401 aaPredicted RBP15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 A0A0D9SFI3 127 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 SLC27A2O14975 620 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 UVSSAQ2YD98 709 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 SLC52A2Q9HAB3 445 aa15.92■□□□□ 0.14
SNRNP200-202ENST00000429650 TERF1P54274 439 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 NECAB1Q8N987 351 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 TPCN1Q9ULQ1 816 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 RRP9O43818 475 aaKnown RBP15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 MYL6BP14649 208 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 DNM1Q05193 864 aaKnown RBP15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 GCKRQ14397 625 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
SNRNP200-202ENST00000429650 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 PSMA5P28066 241 aa15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 HSP90AA2PQ14568 343 aaPredicted RBP15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 EPHA10Q5JZY3 1008 aa15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 RAPGEF4Q8WZA2 1011 aa15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 METTL22Q9BUU2 404 aaPredicted RBP15.9■□□□□ 0.14
SNRNP200-202ENST00000429650 KIF1AQ12756 1690 aa15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 PTMAP06454 111 aaKnown RBP15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 COPS6Q7L5N1 327 aa15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 MYD88Q99836 296 aa15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 MST1RQ04912 1400 aa15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 JCADQ9P266 1359 aa15.89■□□□□ 0.13
SNRNP200-202ENST00000429650 ALS2Q96Q42 1657 aa15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 C1orf167Q5SNV9 1468 aa15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 PHKG2P15735 406 aa15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 RNF20Q5VTR2 975 aa15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 NFATC2IPQ8NCF5 419 aa15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 ZNF496Q96IT1 587 aaPredicted RBP15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 USP25Q9UHP3 1055 aa15.88■□□□□ 0.13
SNRNP200-202ENST00000429650 BLOC1S2Q6QNY1 142 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 LRP10Q7Z4F1 713 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 ZNF589Q86UQ0 364 aaPredicted RBP15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 FUCA2Q9BTY2 467 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 TAF6LQ9Y6J9 622 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 COPRSQ9NQ92 184 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 MEGF6O75095 1541 aa15.87■□□□□ 0.13
SNRNP200-202ENST00000429650 TATP17735 454 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms