RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
LINC01238-203ENST00000429456 FIBPO43427 364 aa13.76□□□□□ -0.21
LINC01238-203ENST00000429456 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
LINC01238-203ENST00000429456 ZKSCAN1P17029 563 aaPredicted RBP13.76□□□□□ -0.21
LINC01238-203ENST00000429456 G3BP1Q13283 466 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01238-203ENST00000429456 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
LINC01238-203ENST00000429456 PDIA6Q15084 440 aa13.76□□□□□ -0.21
LINC01238-203ENST00000429456 ME3Q16798 604 aa13.76□□□□□ -0.21
LINC01238-203ENST00000429456 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
LINC01238-203ENST00000429456 FAM227BQ96M60 508 aa13.75□□□□□ -0.21
LINC01238-203ENST00000429456 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
LINC01238-203ENST00000429456 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
LINC01238-203ENST00000429456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC01238-203ENST00000429456 SLC27A2O14975 620 aa13.74□□□□□ -0.21
LINC01238-203ENST00000429456 CCDC8Q9H0W5 538 aaPredicted RBP13.74□□□□□ -0.21
LINC01238-203ENST00000429456 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
LINC01238-203ENST00000429456 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
LINC01238-203ENST00000429456 PSMA5P28066 241 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
LINC01238-203ENST00000429456 USP25Q9UHP3 1055 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 MRC1P22897 1456 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 AIMP1Q12904 312 aaKnown RBP13.73□□□□□ -0.21
LINC01238-203ENST00000429456 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
LINC01238-203ENST00000429456 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 TRPM3Q9HCF6 1732 aaPredicted RBP13.73□□□□□ -0.21
LINC01238-203ENST00000429456 ZNF142P52746 1687 aaPredicted RBP13.73□□□□□ -0.21
LINC01238-203ENST00000429456 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
LINC01238-203ENST00000429456 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 KCNJ4P48050 445 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 LARP1Q6PKG0 1096 aaKnown RBP13.72□□□□□ -0.21
LINC01238-203ENST00000429456 NECAB1Q8N987 351 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
LINC01238-203ENST00000429456 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
LINC01238-203ENST00000429456 JCADQ9P266 1359 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 DTNBO60941 627 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 ADCY5O95622 1261 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 BOLA2Q9H3K6 86 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 C5P01031 1676 aa13.72□□□□□ -0.21
LINC01238-203ENST00000429456 RGPD5Q99666 1765 aa13.71□□□□□ -0.21
LINC01238-203ENST00000429456 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.21
LINC01238-203ENST00000429456 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
LINC01238-203ENST00000429456 RIC3Q7Z5B4 369 aa13.71□□□□□ -0.21
LINC01238-203ENST00000429456 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
LINC01238-203ENST00000429456 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 UQCRHLA0A096LP55 91 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 KDM4AO75164 1064 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 UQCRHP07919 91 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.22
LINC01238-203ENST00000429456 ANKRD1Q15327 319 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 RNF20Q5VTR2 975 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.22
LINC01238-203ENST00000429456 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 ZNF790Q6PG37 636 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 SASS6Q6UVJ0 657 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 SIL1Q9H173 461 aa13.71□□□□□ -0.22
LINC01238-203ENST00000429456 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
LINC01238-203ENST00000429456 GCKRQ14397 625 aa13.7□□□□□ -0.22
LINC01238-203ENST00000429456 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
LINC01238-203ENST00000429456 BLOC1S2Q6QNY1 142 aa13.7□□□□□ -0.22
LINC01238-203ENST00000429456 NEXNQ0ZGT2 675 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 KLHDC4Q8TBB5 520 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
LINC01238-203ENST00000429456 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 HMG20BQ9P0W2 317 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 ELP1O95163 1332 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 PDCP20941 246 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 KRT85P78386 507 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 SLC39A6Q13433 755 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 TOB2Q14106 344 aaPredicted RBP13.69□□□□□ -0.22
LINC01238-203ENST00000429456 EPHA10Q5JZY3 1008 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 CDC37L1Q7L3B6 337 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 TTC6Q86TZ1 520 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 XAGE3Q8WTP9 111 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 PIBF1Q8WXW3 757 aa13.69□□□□□ -0.22
LINC01238-203ENST00000429456 ERBB3P21860 1342 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 KDM6AO15550 1401 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-203ENST00000429456 ZNF589Q86UQ0 364 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-203ENST00000429456 MYD88Q99836 296 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 COPRSQ9NQ92 184 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 TAF5LO75529 589 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 KRT28Q7Z3Y7 464 aa13.68□□□□□ -0.22
LINC01238-203ENST00000429456 ZNF830Q96NB3 372 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-203ENST00000429456 MST1RQ04912 1400 aa13.67□□□□□ -0.22
LINC01238-203ENST00000429456 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
LINC01238-203ENST00000429456 MYL6BP14649 208 aa13.67□□□□□ -0.22
LINC01238-203ENST00000429456 ATP5JP18859 108 aa13.67□□□□□ -0.22
LINC01238-203ENST00000429456 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
LINC01238-203ENST00000429456 MPNDQ8N594 471 aa13.67□□□□□ -0.22
LINC01238-203ENST00000429456 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
LINC01238-203ENST00000429456 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms