RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 FEZ1Q99689 392 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 ORC3Q9UBD5 711 aaPredicted RBP14.71□□□□□ -0.05
LDB3-205ENST00000429277 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
LDB3-205ENST00000429277 F6X3S4 739 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 C6orf229H3BNL8 230 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 CTNNA2P26232 953 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
LDB3-205ENST00000429277 UBE2HP62256 183 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 CCDC152Q4G0S7 254 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 KRT28Q7Z3Y7 464 aa14.71□□□□□ -0.05
LDB3-205ENST00000429277 CCDC97Q96F63 343 aaPredicted RBP14.71□□□□□ -0.05
LDB3-205ENST00000429277 FOXO3O43524 673 aa14.71□□□□□ -0.06
LDB3-205ENST00000429277 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.06
LDB3-205ENST00000429277 SPAG1Q07617 926 aa14.71□□□□□ -0.06
LDB3-205ENST00000429277 GJB2P29033 226 aa14.7□□□□□ -0.06
LDB3-205ENST00000429277 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
LDB3-205ENST00000429277 MYO1BO43795 1136 aa14.7□□□□□ -0.06
LDB3-205ENST00000429277 USHBP1Q8N6Y0 703 aa14.7□□□□□ -0.06
LDB3-205ENST00000429277 CTAGE1Q96RT6 745 aa14.7□□□□□ -0.06
LDB3-205ENST00000429277 ALDH1L1O75891 902 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 TTC22Q5TAA0 569 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 CCDC113Q9H0I3 377 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 ST5P78524 1137 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
LDB3-205ENST00000429277 NGLY1Q96IV0 654 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.69□□□□□ -0.06
LDB3-205ENST00000429277 TBCAO75347 108 aaKnown RBP14.69□□□□□ -0.06
LDB3-205ENST00000429277 ZBTB3Q9H5J0 574 aa14.69□□□□□ -0.06
LDB3-205ENST00000429277 TNNT1P13805 278 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 IDEP14735 1019 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 NF2P35240 595 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 RBM25P49756 843 aaKnown RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 GUCY1B3Q02153 619 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 CTNNBL1Q8WYA6 563 aaPredicted RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 IDI1Q13907 227 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 CCDC174Q6PII3 467 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 GIGYF2Q6Y7W6 1299 aaKnown RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 TNPO1Q92973 898 aaKnown RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 TTLL12Q14166 644 aaPredicted RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.06
LDB3-205ENST00000429277 TUBB4AP04350 444 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 ACTN2P35609 894 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 HDAC1Q13547 482 aaPredicted RBP14.68□□□□□ -0.06
LDB3-205ENST00000429277 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 KCNG4Q8TDN1 519 aa14.68□□□□□ -0.06
LDB3-205ENST00000429277 CCT2P78371 535 aaKnown RBP14.67□□□□□ -0.06
LDB3-205ENST00000429277 TCERG1LQ5VWI1 586 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 CCDC82Q8N4S0 544 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 LRRC45Q96CN5 670 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 FSD2A1L4K1 749 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 CCDC175P0C221 793 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 SYCP3Q8IZU3 236 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 ESR2Q92731 530 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 TBC1D2Q9BYX2 928 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 ZNF165P49910 485 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 WDR78Q5VTH9 848 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 ANKRD13DQ6ZTN6 518 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 NOS1P29475 1434 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 RPRD2Q5VT52 1461 aaKnown RBP14.67□□□□□ -0.06
LDB3-205ENST00000429277 SSFA2P28290 1259 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 WTAPQ15007 396 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 SMARCC1Q92922 1105 aaPredicted RBP14.67□□□□□ -0.06
LDB3-205ENST00000429277 PRPHP41219 470 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 PPM1EQ8WY54 764 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 GOPCQ9HD26 462 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 EXOC1Q9NV70 894 aa14.67□□□□□ -0.06
LDB3-205ENST00000429277 CKAP4Q07065 602 aaKnown RBP14.66□□□□□ -0.06
LDB3-205ENST00000429277 PI4KAP2A4QPH2 592 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 GPTP24298 496 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 PI4KAP1Q8N8J0 262 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 TMCO5BA8MYB1 307 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 KLHL40Q2TBA0 621 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 SPECC1LQ69YQ0 1117 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 TMC6Q7Z403 805 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 CKAP2LQ8IYA6 745 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 ANKRD24Q8TF21 1146 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 MBIPQ9NS73 344 aa14.66□□□□□ -0.06
LDB3-205ENST00000429277 RFC4P35249 363 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 MICU3Q86XE3 530 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 TMEM87AQ8NBN3 555 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 PAXBP1Q9Y5B6 917 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 USP25Q9UHP3 1055 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 HDAC9Q9UKV0 1011 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 CCDC171Q6TFL3 1326 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 MACROD2A1Z1Q3 448 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 B4DLN1 442 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 PRC1O43663 620 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 MRPL12P52815 198 aaKnown RBP14.65□□□□□ -0.06
LDB3-205ENST00000429277 HLTFQ14527 1009 aaKnown RBP eCLIP14.65□□□□□ -0.06
LDB3-205ENST00000429277 TTC12Q9H892 705 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms